Transcript Information: S_Transcript_216707.p2


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.2394825594109
Replicate 32.2794392912315
Condition 2: 8 Hour
Replicate 11.4376667629528
Replicate 23.0164290300755
Replicate 31.6765273397176
Condition 3: 24 Hour
Replicate 10.7363443873234
Replicate 22.2918461144621
Replicate 31.983756301526


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216707.p2 GENE.S_Transcript_216707~~S_Transcript_216707.p2 ORF type:5prime_partial len:89 (+),score=7.51 S_Transcript_216707:3-269(+)
CCACCACAAAAACTACTTGGGTTGTCAAATACGCAAGATTCTTCACCTTCCCATCTACTTCTACTGCCACCACATCCACCACTTTACGACCCCTTTTCCCCAAAACGAAACGCCTTGTTAAGGGCACTTGGGTTTCCTCCTTTTCCACCAATGTCTCCCTTCACATCCTATTTGACCGCCATGAACCAACCCTTGTTGTGTCTCATCTCAAAAACGTCTATGAAGAACACTATATCTCCAATCTGCATTTCACATGGCCTCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216707.p2 GENE.S_Transcript_216707~~S_Transcript_216707.p2 ORF type:5prime_partial len:89 (+),score=7.51 S_Transcript_216707:3-269(+)
PPQKLLGLSNTQDSSPSHLLLLPPHPPLYDPFSPKRNALLRALGFPPFPPMSPFTSYLTAMNQPLLCLISKTSMKNTISPICISHGLR*

Click here to download the sequence:
Link to NCBI Protein BLAST