Transcript Information: S_Transcript_216708.p1


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.36771315929191
Replicate 30.30737893472668
Condition 2: 8 Hour
Replicate 10.59237195325369
Replicate 20.87001633598937
Replicate 31.3026351314155
Condition 3: 24 Hour
Replicate 10.97088371069307
Replicate 21.3850107074434
Replicate 31.6814696270077


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216708.p1 GENE.S_Transcript_216708~~S_Transcript_216708.p1 ORF type:complete len:180 (+),score=13.67 S_Transcript_216708:74-613(+)
ATGAGTCACAGTCACGCCCCTCTCGCCCAAACCCTTTACCATGGAAGCAACAATCTCGGAACCCCCACCACAAAAACTACTTGGGTTGTCAAATACGCAAGATTCTTCACCTTCCCATCTACTTCTACTGCCACCACATCCACCACTTTACGACCCCTTTTCCCCAAAACGAAACGCCTTGTTAAGGGCACTTGGGTTTCCTCCTTTTCCACCAATGTCTCCCTTCACATCCTATTTGACCGCCATGAACCAACCCTTGTTGTGTCTCATCTCAAAAACGTCTATGAAGAACACTATATCTCCAATCTGCATTTCACATGGCCTCAGGTGTCCTGTCCTCCTGAATCTGCTGTTCAAGGAAGCAGTGTGATATTTGCTAGTTTCAGAGACAGTATGCACCAGGCAATCCCCTTAACTTTAACTAAGAATACAAGTAAAGAAGAGCTAATTGCCATTTTATTGTACATTGCTGAACATGTGTGTCAAAAGCATCCAGAGTGTCAGTTGTCAAGTATATTTCATACATGTAGAATGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216708.p1 GENE.S_Transcript_216708~~S_Transcript_216708.p1 ORF type:complete len:180 (+),score=13.67 S_Transcript_216708:74-613(+)
MSHSHAPLAQTLYHGSNNLGTPTTKTTWVVKYARFFTFPSTSTATTSTTLRPLFPKTKRLVKGTWVSSFSTNVSLHILFDRHEPTLVVSHLKNVYEEHYISNLHFTWPQVSCPPESAVQGSSVIFASFRDSMHQAIPLTLTKNTSKEELIAILLYIAEHVCQKHPECQLSSIFHTCRMF*

Click here to download the sequence:
Link to NCBI Protein BLAST