Transcript Information: S_Transcript_216711.p1


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.41471408942697
Replicate 30.4160015657955
Condition 2: 8 Hour
Replicate 11.4430715252195
Replicate 20.50462816480586
Replicate 30.88148241975487
Condition 3: 24 Hour
Replicate 11.3139779543215
Replicate 21.0224275899104
Replicate 30.75855772646966


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216711.p1 GENE.S_Transcript_216711~~S_Transcript_216711.p1 ORF type:complete len:266 (+),score=35.81 S_Transcript_216711:74-871(+)
ATGAGTCACAGTCACGCCCCTCTCGCCCAAACCCTTTACCATGGAAGCAACAATCTCGGAACCCCCACCACAAAAACTACTTGGGTTGTCAAATACGCAAGATTCTTCACCTTCCCATCTACTTCTACTGCCACCACATCCACCACTTTACGACCCCTTTTCCCCAAAACGAAACGCCTTGTTAAGGGCACTTGGGTTTCCTCCTTTTCCACCAATGTCTCCCTTCACATCCTATTTGACCGCCATGAACCAACCCTTGTTGTGTCTCATCTCAAAAACGTCTATGAAGAACACTATATCTCCAATCTGCATTTCACATGGCCTCAGGTGTCCTGTCCTCCTGAATCTGCTGTTCAAGGAAGCAGTGTGATATTTGCTAGTTTCAGAGACAGTATGCACCAGTGCTTGAGGGACACATGGAAGGTCAACTGTTCAAGGGGCACAACATCCACTTCCAGGCATCAGAGGATTGATAAAGAATCAAATTGTATAAATCGTCTTGTGGAGAGTAATACTACTACTACCCTGTGGCAACCTACCATCCATCAGGAACGTATTCAGCACTCGTATTCTCAACACACAATGCTAAGGGATGGTGTGGAAAGCAGTGATGCTGGTTTGCCTCGTAGCTTTACTGCACTTGTTAATGAGAGTTGTACTGAGACTGATCCAGGAGTACCTCCCCAGCACCAATCTCTCAAGGGAAGCGTTGCTGACTATTCTTTCTTAGATATGCTGGACAAGATTGAGTATGTCATTTCTGCACTGGGAGGGGACTTTGCATTTTCAGGAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216711.p1 GENE.S_Transcript_216711~~S_Transcript_216711.p1 ORF type:complete len:266 (+),score=35.81 S_Transcript_216711:74-871(+)
MSHSHAPLAQTLYHGSNNLGTPTTKTTWVVKYARFFTFPSTSTATTSTTLRPLFPKTKRLVKGTWVSSFSTNVSLHILFDRHEPTLVVSHLKNVYEEHYISNLHFTWPQVSCPPESAVQGSSVIFASFRDSMHQCLRDTWKVNCSRGTTSTSRHQRIDKESNCINRLVESNTTTTLWQPTIHQERIQHSYSQHTMLRDGVESSDAGLPRSFTALVNESCTETDPGVPPQHQSLKGSVADYSFLDMLDKIEYVISALGGDFAFSGT*

Click here to download the sequence:
Link to NCBI Protein BLAST