Transcript Information: S_Transcript_216720.p1


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.603843917264
Replicate 21.5321381637163
Replicate 31.9211183420417
Condition 2: 8 Hour
Replicate 11.9252088480745
Replicate 21.7866406899782
Replicate 32.7384943103622
Condition 3: 24 Hour
Replicate 11.0619040585705
Replicate 21.8886509646956
Replicate 32.452143206053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216720.p1 GENE.S_Transcript_216720~~S_Transcript_216720.p1 ORF type:complete len:288 (+),score=42.82 S_Transcript_216720:74-937(+)
ATGAGTCACAGTCACGCCCCTCTCGCCCAAACCCTTTACCATGGAAGCAACAATCTCGGAACCCCCACCACAAAAACTACTTGGGTTGTCAAATACGCAAGATTCTTCACCTTCCCATCTACTTCTACTGCCACCACATCCACCACTTTACGACCCCTTTTCCCCAAAACGAAACGCCTTGTTAAGGGCACTTGGGTTTCCTCCTTTTCCACCAATGTCTCCCTTCACATCCTATTTGACCGCCATGAACCAACCCTTGTTGTGTCTCATCTCAAAAACGTCTATGAAGAACACTATATCTCCAATCTGCATTTCACATGGCCTCAGGTGTCCTGTCCTCCTGAATCTGCTGTTCAAGGAAGCAGTGTGATATTTGCTAGTTTCAGAGACAGTATGCACCAGATCCAGAAGTTTGCTGTAAGGTTCTCTTCTTCTGTAGAATCTCAAGCTTTCATTGAATCTCTGAAGTGCTTGAGGGACACATGGAAGGTCAACTGTTCAAGGGGCACAACATCCACTTCCAGGCATCAGAGGATTGATAAAGAATCAAATTGTATAAATCGTCTTGTGGAGAGTAATACTACTACTACCCTGTGGCAACCTACCATCCATCAGGAACGTATTCAGCACTCGTATTCTCAACACACAATGCTAAGGGATGGTGTGGAAAGCAGTGATGCTGGTTTGCCTCGTAGCTTTACTGCACTTGTTAATGAGAGTTGTACTGAGACTGATCCAGGAGTACCTCCCCAGCACCAATCTCTCAAGGGAAGCGTTGCTGACTATTCTTTCTTAGATATGCTGGACAAGATTGAGTATGTCATTTCTGCACTGGGAGGGGACTTTGCATTTTCAGGAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216720.p1 GENE.S_Transcript_216720~~S_Transcript_216720.p1 ORF type:complete len:288 (+),score=42.82 S_Transcript_216720:74-937(+)
MSHSHAPLAQTLYHGSNNLGTPTTKTTWVVKYARFFTFPSTSTATTSTTLRPLFPKTKRLVKGTWVSSFSTNVSLHILFDRHEPTLVVSHLKNVYEEHYISNLHFTWPQVSCPPESAVQGSSVIFASFRDSMHQIQKFAVRFSSSVESQAFIESLKCLRDTWKVNCSRGTTSTSRHQRIDKESNCINRLVESNTTTTLWQPTIHQERIQHSYSQHTMLRDGVESSDAGLPRSFTALVNESCTETDPGVPPQHQSLKGSVADYSFLDMLDKIEYVISALGGDFAFSGT*

Click here to download the sequence:
Link to NCBI Protein BLAST