Transcript Information: S_Transcript_217033.p1


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.81506623815
Replicate 23.5063112988715
Replicate 34.1033960479405
Condition 2: 8 Hour
Replicate 16.3089785534794
Replicate 25.0322984715278
Replicate 33.7003060634564
Condition 3: 24 Hour
Replicate 13.7387331157496
Replicate 24.3221938947557
Replicate 33.6383878237209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217033.p1 GENE.S_Transcript_217033~~S_Transcript_217033.p1 ORF type:internal len:409 (-),score=104.62,PPR_2|PF13041.2|5.4e-05,PPR_2|PF13041.2|2.5e-07,PPR_2|PF13041.2|1.9,PPR_2|PF13041.2|0.00038,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|7.9e-09,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|6.1,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|6.1,PPR_2|PF13041.2|27,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|21,PPR|PF01535.16|0.091,PPR|PF01535.16|0.015,PPR|PF01535.16|0.3,PPR|PF01535.16|0.0019,PPR|PF01535.16|85,PPR|PF01535.16|0.0019,PPR|PF01535.16|1e+02,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|14,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|66,PPR_1|PF12854.3|33,PPR_1|PF12854.3|66,PPR_1|PF12854.3|33,PPR_3|PF13812.2|76,PPR_3|PF13812.2|8.3e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.5e+02 S_Transcript_217033:2-1225(-)
GGTAGGTCTGAGGATGCGATCATGACGTTTGAAGTGATGGATAAGTACGGCATTGAGCCCGACGTGGTTGCTGTGAATTCCTTGCTGAGCGCCATGTGCCAGGAGAAGGATCAAGTCCAGAAGGCATATAGTTTCTTTGACAAGATCAAGGTGAAGATTCCACCTGATGGGGACTCGTTTGCAATTCTCTTGGAGGGTTGTGAGAAGGAGGGGAATGTTACCAAGGCCAAGGCTACATTTGGGGAGATGGTGGTTCGTGTTGGCTGGGATGCCAAGAATATGCTGGCTTACAATGCTTTTTTAATGACTCTTGTTCGTGGATCACAAGTTGATGAGGCTGTCAAGTTTCTCCATGTTATGAAGGGGAAAGGCTGCTTGCCAGGTTTGAAATTCTTTTCCCATGCTCTTGATATTCTTGTTAAGCAGAACGATTCTTCCCATGCTGGTCCCTTGTGGGATACAATGGTGGGGAGCGGCATAATGCCTAATTTGATCATGTTCAATGCCATCATTGGCCTGGTTTGCTACAACAATGACATAGACAATGCCTTCCGCTTCCTTGACGACATGCCATTCTATGGAGTTTTCCCTGAATCTCTAACTTATAACATGATCTTCAAATGTCTGATAAACAACAAGAAGGTTCGTGAGGTGGCCTCCTTTTTCAAAGAGATGGTGAAGAATGAATGCCCTCCAACACATGCCAATTGTGCTGCAGCAATAGAGATGCTGTTCAATCGGGATGATCCAGAGACAGGAATTGAGATTTGGGACTATGTGCTTGATAATAATGTCATGCCTATTGATGAGAGTGCAAATATGCTGCTCCTTGGGCTTTGCAAGATAGGTCGTTTCTCAGAATTGAGGAGGTTTGCCACTGACATGCCATTCTATGGAGTTTTCCCTGAATCTCTAACTTATAACATGATCTTCAAATGTCTGATAAACAACAAGAAGGTTCGTGAGGTGGCCTCCTTTTTCAAAGAGATGGTGAAGAATGAATGCCCTCCAACACATGCCAATTGTGCTGCAGCAATAGAGATGCTGTTCAATCGGGATGATCCAGAGACAGGAATTGAGATTTGGGACTATGTGCTTGATAATAATGTCATGCCTATTGATGAGAGTGCAAATATGCTGCTCCTTGGGCTTTGCAAGATAGGTCGTTTCTCAGAATTGAGGAGGTTTGCCACTGACGTGCTGGATCAAAGGATTATCATTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217033.p1 GENE.S_Transcript_217033~~S_Transcript_217033.p1 ORF type:internal len:409 (-),score=104.62,PPR_2|PF13041.2|5.4e-05,PPR_2|PF13041.2|2.5e-07,PPR_2|PF13041.2|1.9,PPR_2|PF13041.2|0.00038,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|7.9e-09,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|6.1,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|6.1,PPR_2|PF13041.2|27,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|21,PPR|PF01535.16|0.091,PPR|PF01535.16|0.015,PPR|PF01535.16|0.3,PPR|PF01535.16|0.0019,PPR|PF01535.16|85,PPR|PF01535.16|0.0019,PPR|PF01535.16|1e+02,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|14,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|66,PPR_1|PF12854.3|33,PPR_1|PF12854.3|66,PPR_1|PF12854.3|33,PPR_3|PF13812.2|76,PPR_3|PF13812.2|8.3e+03,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.5e+02 S_Transcript_217033:2-1225(-)
GRSEDAIMTFEVMDKYGIEPDVVAVNSLLSAMCQEKDQVQKAYSFFDKIKVKIPPDGDSFAILLEGCEKEGNVTKAKATFGEMVVRVGWDAKNMLAYNAFLMTLVRGSQVDEAVKFLHVMKGKGCLPGLKFFSHALDILVKQNDSSHAGPLWDTMVGSGIMPNLIMFNAIIGLVCYNNDIDNAFRFLDDMPFYGVFPESLTYNMIFKCLINNKKVREVASFFKEMVKNECPPTHANCAAAIEMLFNRDDPETGIEIWDYVLDNNVMPIDESANMLLLGLCKIGRFSELRRFATDMPFYGVFPESLTYNMIFKCLINNKKVREVASFFKEMVKNECPPTHANCAAAIEMLFNRDDPETGIEIWDYVLDNNVMPIDESANMLLLGLCKIGRFSELRRFATDVLDQRIIIH

Click here to download the sequence:
Link to NCBI Protein BLAST