Transcript Information: S_Transcript_217046.p1


Annotated TAIR IDAT5G40450.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16184799-16195513 | Reverse length=2889
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73246792390405
Replicate 20.40482182674339
Replicate 30.67679765444406
Condition 2: 8 Hour
Replicate 11.5651662618079
Replicate 20.41049263559131
Replicate 31.7600241141728
Condition 3: 24 Hour
Replicate 10.6012353254292
Replicate 21.0396243842361
Replicate 30.69418470839769


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217046.p1 GENE.S_Transcript_217046~~S_Transcript_217046.p1 ORF type:internal len:109 (+),score=39.91 S_Transcript_217046:2-325(+)
CAGGAAGATGAACAAGATGAGGCTAGTCAAGTTGATCAAGTGGTTGCGAAAAGCTCGGGTTACGAGGATTCGCAAACTCCGGTTTTCATGGTTGAGGAGAAGAGTTCACCAGTTTTGCAGGATGAGAAACATAAGGATTCAGAAATTTCTTCACCGGATCAGATTGAAGAGAGGTGTTTACCAGTTTTGCAGGATGACAAACTGAAGGATTCAGAAATTTATTCACAAGTTCAGGAAGATGAAGACAAGATTGAGGAAATTTCAGAAACCTTACAGTCCTACAATGAGGTGAAGAATGAGATAGAGAATGTAGAGATTTCACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217046.p1 GENE.S_Transcript_217046~~S_Transcript_217046.p1 ORF type:internal len:109 (+),score=39.91 S_Transcript_217046:2-325(+)
QEDEQDEASQVDQVVAKSSGYEDSQTPVFMVEEKSSPVLQDEKHKDSEISSPDQIEERCLPVLQDDKLKDSEIYSQVQEDEDKIEEISETLQSYNEVKNEIENVEISQ

Click here to download the sequence:
Link to NCBI Protein BLAST