Transcript Information: S_Transcript_2171.p1


Annotated TAIR IDAT5G56610.1
Annotated Gene NamePhosphotyrosine protein phosphatases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22916738-22918137 | Forward length=228
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5615469089922
Replicate 211.031394778757
Replicate 311.866256549913
Condition 2: 8 Hour
Replicate 113.225048258687
Replicate 214.220865026803
Replicate 313.962706376906
Condition 3: 24 Hour
Replicate 112.192493111029
Replicate 211.683282711838
Replicate 37.8207889628267


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2171.p1 GENE.S_Transcript_2171~~S_Transcript_2171.p1 ORF type:complete len:258 (+),score=40.00,DSPc|PF00782.16|2.5e-10 S_Transcript_2171:222-995(+)
ATGAGTTGGGGTATCTCAAGGTTCATATTTCTGAAGGCAGTATTTCATTTCATGTTATTTATGTACATGAGAAGCATAGGTTTGAAATTAATGGCAATCCCATTCTTATATGCATCACTGATTTCATTGCTGATTTCAATTGCCTCACATCCTGATATAAACTTGCCTATGTTGTTGGGAAAAACCACAGATGGGAGTTTTCCCATATGGGCAGTTATTCTATTTGGCCCATTCTTGTATTTTGTGAGGACTTTTTCAATGATAAGAAGATTCTTTAGTAAGGAAGAACCTTATACTGAGATATGTGAAGGTGTGTATGTAGGGGGTTGGCCTTGTAATAGTGCTGCTTTCCCACCTGGTAACCCTGCTATTATTGACTGTACTTGTGAGTTTCCTCGCAAGCCGGAGTTCGTTAAGAATGGTTATTTGTGTATTCCTACATGGGATACGAGGTCGCCTCAGCCTTCTGATATCGAATCTGCTGTTAAATGGGCTTGCAGAAAGAGAGCTCAAGGAGTGCCTGTCTTCATTCACTGTGCCTATGGTCATGGAAGAAGTGTTGCAGTTATGTGCGCATTTTTGGTGGCTTTAGGAGTTGCTGATAACTGGAAAGATGCAGAGAAGCTGATTCAAAGAAAGCGGCCTTATATCAGGATGAATTCTCTTCATCGTAAGGCCCTCGAGGAATGGGCAAAGCATCGATTATCTCCAATTAAAAGTAGTGGAACAGATGTGAGCTCTGTCATCTTATCAAGTGCTTCAGGAAGCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2171.p1 GENE.S_Transcript_2171~~S_Transcript_2171.p1 ORF type:complete len:258 (+),score=40.00,DSPc|PF00782.16|2.5e-10 S_Transcript_2171:222-995(+)
MSWGISRFIFLKAVFHFMLFMYMRSIGLKLMAIPFLYASLISLLISIASHPDINLPMLLGKTTDGSFPIWAVILFGPFLYFVRTFSMIRRFFSKEEPYTEICEGVYVGGWPCNSAAFPPGNPAIIDCTCEFPRKPEFVKNGYLCIPTWDTRSPQPSDIESAVKWACRKRAQGVPVFIHCAYGHGRSVAVMCAFLVALGVADNWKDAEKLIQRKRPYIRMNSLHRKALEEWAKHRLSPIKSSGTDVSSVILSSASGSK*

Click here to download the sequence:
Link to NCBI Protein BLAST