Transcript Information: S_Transcript_21726.p1


Annotated TAIR IDAT5G16180.1
Annotated Gene NameOrtholog of maize chloroplast splicing factor CRS1
Annotated Gene Symbol(s)CRS1, ATCRS1
Annotation TypeOrtholog
Chromosome Positionchr5:5279884-5282898 | Forward length=720
E-Value1.5E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.071066568617
Replicate 222.943029552731
Replicate 325.539747781151
Condition 2: 8 Hour
Replicate 122.093872851084
Replicate 223.897856333299
Replicate 323.647697085578
Condition 3: 24 Hour
Replicate 127.186618192284
Replicate 225.726488816394
Replicate 325.059740387065


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21726.p1 GENE.S_Transcript_21726~~S_Transcript_21726.p1 ORF type:5prime_partial len:777 (+),score=185.58,CRS1_YhbY|PF01985.17|3.8e-19,CRS1_YhbY|PF01985.17|4e-17,CRS1_YhbY|PF01985.17|7.7e-21 S_Transcript_21726:1-2331(+)
TTTTCCAATTTACTTTTCTATCCTTTCAATGTTTCATCCTCTCGAACTTCGAACAACAAATTCTGGAACACCAATTCAATGACTGTAACTCTCTTTCTCTCCTCTCCACAATTTCCCCTCTTTTCAACCTCATCTTCAGTTTCTCTTGTCATCCTCAAAAACCCAAAACCCCTTCATTCTCTTTCCTCAAATGCCACTTCTTTCTTCCTCCAAAATCAATGCTTTCCCCTGACAAACAACAAGGACAAACACAAGCAAAATAGCAATGAAAATGAAGGTGATGTTGAAGCTAACACAGACAGCTCTAAGATCAAAATGCCCACTGCCCCTTGGATGAAGGGCCCTTTGCTACTTGAACCCGATCAAGTTCTGAACCTCTCAAAACCAACACCCAAGAAAAGAACCGAACCCCATAAAGTGGACAGGTCACTCACTGAAAAGGTTAGTGGGAGGAGGGGCAACAAGGCTATGAAGAAAATAGTTCAGAGCATTGAAAAGCTTCATCTGGTTGATACCCAGAAAAATTGGGATGATACCCAGATAAAAAGATGTGATTTTGAAGGTGGGTTTTTGATGGGGAAGCTTGAGGTTGAGGATTCTCATGGTGGGGTCTCCAAATTTGGGCAAAAAATGCCTTGGGAGAGAGAGGAGAAGGTGGTTTTTAGGAGGTTGAAGAGAGAGAAAGTGGAAAGTGCTGCAGAATTGAGTCTTGATAAGGATTTGTTGATGAGATTGAGAGGAGAAGCTTCAAAGATGAGGAAATGGGTTAAGGTGAAGAAAGCTGGTGTCACTCAAGCTGTTATTGATGAAGTTCATTCACTTTGGGCTAATAATGAGCTTGTTATGTTCAAGTTTGATATGCCCTTGTGTAGAAATATGGATAGAGCCCGCGAAATTGTTGAGATTAAAACGGGAGGAATAGTTGTATGGAGTAAAAAAGATAGCCTTGTTGCCTATAGAGGATGCAATTATCAAGTAAGGAGACGGGTTAAAAAGACTCATGCTGAGTTTTCTCATGGAGAACAGACGTCTGCCTTCATACCTAGTTACCAGAGATACCTAAGGATTCAGTCAAATGATGGCTCGCTATATGAGAAGGAAGCTGATAGATTAGTGGATGGTTTGGGGCCTCGATTTATTGACTGGTGGTACCCGAAGCCCTTACCTGTTGATGGAGACCTGCTTCCAGAGATAGTTCCTGGATTCAAGACTCCTTTTAGGCGTTGCCCACCTCTTGTTCGGCCACAACTTACAGATGATGAATTGACCTATCTCAGGAAACTTGCTCGGCCTTTACCAGTACACTTTGTCTTAGGGAGGAACTTCAAACTTCAAGGTCTTGCTGTTGCCATCTTAAAGTTGTGGGAGAGAACTATAATTGCCAAAATTGCGGTGAAGTGGGGAGTTCCAAACACCAACAATGAACTCATGGCTGATGAGCTTAAGCGTCTTACAGGAGGAGTTTTGTTGCTACGTAACAAGTTCTTCATCATTCTTTACAGAGGGAAAGATTTTTTACCTGGAAATGTTGCGAATATGGTGGTTGACAGAGAAGTGGAGCTCGCAAAGTGGCACCTCCATGAAGAAGATGCACGAGGTAAGGCAGCCGGGATTCTTAACGTGAATGCTGAAACAGCAACAGATACCAGTGTCGTTGGAACTTTTTCAGAATTTCAAAATATCCGAGCAATTTCTGGGAAATTAAGCCATAGTGAAGCTGAAATTAAGTTAGCAGCTGAGAAAGAAAGATTAGAGGGGGAACTCAGAAAGCAGGAGCACAAGCTTGCCATTCTCAAATTCAAAATTCGAAAGGCTGAAAGAGAGCTGTCAAAATTGAATTCTGCTTGGGAGCCTTCTGAGCAAGAGCCTGATCAAGAGTTGCTCACTGAAGAGGAGAGAGAAGGTCTTAGGAAGATAGGTCTGAAGATGGACCGGGTTCTAGTGCTAGGGAGGCGAGGGGTCTTTGATGGAGTGATAGAAGGCCTGCACCAGCACTGGAAGCACAGAGAACTAGTCAAGGTTATCACAATGCAGAAAAGATTTATACAGGTTGTTGATACTGCTAAATTGCTGGAAAGAGAGACTGGTGGGTTACTATTATCGATCGACCCGCTAAAAAGTGGCCATGCTATAATTATATATCGGGGGAAAAACTACAAGCGTCCTGTAGATTTTGGTGGAAATCTCCTTGATAAAGGGAAAGCATTAAAAAGATCTCTTGAAATGCAGAGAGTTGGATCCCTCAAGTTTTTTGCATATCAAAGAGGAAAGGAGATTGCAGATTTGAGGCTCAAATTGGTTGAGTTGGAGAAGCAGAGTACTGGAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21726.p1 GENE.S_Transcript_21726~~S_Transcript_21726.p1 ORF type:5prime_partial len:777 (+),score=185.58,CRS1_YhbY|PF01985.17|3.8e-19,CRS1_YhbY|PF01985.17|4e-17,CRS1_YhbY|PF01985.17|7.7e-21 S_Transcript_21726:1-2331(+)
FSNLLFYPFNVSSSRTSNNKFWNTNSMTVTLFLSSPQFPLFSTSSSVSLVILKNPKPLHSLSSNATSFFLQNQCFPLTNNKDKHKQNSNENEGDVEANTDSSKIKMPTAPWMKGPLLLEPDQVLNLSKPTPKKRTEPHKVDRSLTEKVSGRRGNKAMKKIVQSIEKLHLVDTQKNWDDTQIKRCDFEGGFLMGKLEVEDSHGGVSKFGQKMPWEREEKVVFRRLKREKVESAAELSLDKDLLMRLRGEASKMRKWVKVKKAGVTQAVIDEVHSLWANNELVMFKFDMPLCRNMDRAREIVEIKTGGIVVWSKKDSLVAYRGCNYQVRRRVKKTHAEFSHGEQTSAFIPSYQRYLRIQSNDGSLYEKEADRLVDGLGPRFIDWWYPKPLPVDGDLLPEIVPGFKTPFRRCPPLVRPQLTDDELTYLRKLARPLPVHFVLGRNFKLQGLAVAILKLWERTIIAKIAVKWGVPNTNNELMADELKRLTGGVLLLRNKFFIILYRGKDFLPGNVANMVVDREVELAKWHLHEEDARGKAAGILNVNAETATDTSVVGTFSEFQNIRAISGKLSHSEAEIKLAAEKERLEGELRKQEHKLAILKFKIRKAERELSKLNSAWEPSEQEPDQELLTEEEREGLRKIGLKMDRVLVLGRRGVFDGVIEGLHQHWKHRELVKVITMQKRFIQVVDTAKLLERETGGLLLSIDPLKSGHAIIIYRGKNYKRPVDFGGNLLDKGKALKRSLEMQRVGSLKFFAYQRGKEIADLRLKLVELEKQSTGK*

Click here to download the sequence:
Link to NCBI Protein BLAST