Transcript Information: S_Transcript_217425.p1


Annotated TAIR IDAT3G62140.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:23007277-23008626 | Forward length=214
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5345715462077
Replicate 21.260730831858
Replicate 31.5808059500229
Condition 2: 8 Hour
Replicate 10.6092968662038
Replicate 20.63919567542076
Replicate 30.60902421728518
Condition 3: 24 Hour
Replicate 10.83218603773692
Replicate 23.4535331925863
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217425.p1 GENE.S_Transcript_217425~~S_Transcript_217425.p1 ORF type:5prime_partial len:105 (+),score=34.80 S_Transcript_217425:3-317(+)
CCTGTTTCTGATGTTCAGCAGGAGAAGAGGACAGTGGGAAAGAAGAATAAGCCTCTTGAGCCATTGGGTATGATTATAAAAGTGAAGCCAGCAGCCAAGAAAACTAAAGTGGATCCATCACCAGTGCAGCCATTTGGAGCTGTGGTAAAGCATGCTGTGGAGACTCAACAATGTTCAAGCCCTTGGGAAATTCCAAATGGTGGTAGAGATGTTTGTCAGGAACCATTAAAGAATTCTGAGAGTAATAGGGAAAATACTCATAATGTCGCAATGACTGGTCTCGTTTCATACAGTGATGAAAGTGATGATGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217425.p1 GENE.S_Transcript_217425~~S_Transcript_217425.p1 ORF type:5prime_partial len:105 (+),score=34.80 S_Transcript_217425:3-317(+)
PVSDVQQEKRTVGKKNKPLEPLGMIIKVKPAAKKTKVDPSPVQPFGAVVKHAVETQQCSSPWEIPNGGRDVCQEPLKNSESNRENTHNVAMTGLVSYSDESDDD*

Click here to download the sequence:
Link to NCBI Protein BLAST