Transcript Information: S_Transcript_217441.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4330077588174
Replicate 20.67885506330815
Replicate 30.99307040450157
Condition 2: 8 Hour
Replicate 10.49212439193384
Replicate 20.68836457353005
Replicate 30.49190417549957
Condition 3: 24 Hour
Replicate 11.1762629571858
Replicate 21.394696097006
Replicate 30.5820471785796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217441.p3 GENE.S_Transcript_217441~~S_Transcript_217441.p3 ORF type:3prime_partial len:130 (+),score=18.12,RVT_1|PF00078.23|5.3e-24 S_Transcript_217441:3138-3524(+)
ATGATGAAGATTGATATACAAAAAGCATATGATAGCTTGGAGTGGAGTTTTTTAAGGCAAGTGATGGTGGAAATGGGGTTTCCTCCAAGATTTATTCAATGGGTAATGACTTGTGTTTCTACTGTTTCATATGTGTTGTGTATTAATGGTGATTTGCAAAAACTCATTGAGGCTAAAAGAGGGCTTAGACAAGGAGATCCACTATCTCCTTTTTTATTTGTCATAGCCATGGAGTATCTTACTAGGTGTATGAAGGGTTTGAAAGAAAAACAGGGTTTCAAGTTCCATCCAAAGTGCAAGAAAGTGAATTTGACTCACTTATGTTTTGCGGATGATTTAATGTTATTTTCCCATGGAGATCTACATTCACTGAGATTGATTAAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217441.p3 GENE.S_Transcript_217441~~S_Transcript_217441.p3 ORF type:3prime_partial len:130 (+),score=18.12,RVT_1|PF00078.23|5.3e-24 S_Transcript_217441:3138-3524(+)
MMKIDIQKAYDSLEWSFLRQVMVEMGFPPRFIQWVMTCVSTVSYVLCINGDLQKLIEAKRGLRQGDPLSPFLFVIAMEYLTRCMKGLKEKQGFKFHPKCKKVNLTHLCFADDLMLFSHGDLHSLRLIKE

Click here to download the sequence:
Link to NCBI Protein BLAST