Transcript Information: S_Transcript_217594.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.09305245187126
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.074564301808157
Replicate 20
Replicate 30.074530935681753
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217594.p1 GENE.S_Transcript_217594~~S_Transcript_217594.p1 ORF type:complete len:286 (-),score=36.95,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-16,zf-RVT|PF13966.2|3.1e+03 S_Transcript_217594:274-1131(-)
ATGAAGCTGGTGGAAACAACTTGTAGAACCTTCCTTTGGACTGGTGGCTGCTCCCTAAGCAAAAGAGCTCTTGTGGCCTGGGAGAGAATCTGTTTGCCTAGATGTGCAGGTGGTCTGAATATTACAAACATTCACATTTGGAATAGAGCTAGTCTTCTGAAATTGCATTGGGATCTAGCAAATAAGAAGGATAAACTTTGGATACAATGGGTTCATATTTATTATTTCAAAAAGAGAAGATTTGAGTTCAGTGCTGAGTGTAAGAATGCTTGTTGGATGATTCAAAAGATCATTAGAGCAGGTAAATACATTCAAGGGATTTGTGAATGGAATGATATTGTGAAGAAGCAGAAGGTGAGCACCAGGGAAGCATATATCAAACTATTGGGCAGGCATCAGAAAGTACAATGGAGGAAACTGATTATTGGTAATGCAGCAAGACCTAGAGCTATATTCATTTTGTGGCTGGCTCTCTGGGGCAGGCTTAGTACAGCAGAACGATTACAAAAAATGGGCATTTCCTGTCCAGTGGAATGCTCCTTTTGCAACAAGGATAATGAAAGTGTCAATCATGTAATATTTACATGTCCTTGGGTGCAGCAAATTTGGAGAAATATGTTTCAGTGGATTCATCTTTCCTTCCATGCAGATATACAACAAAAGCTTATCAATCATAGCAAACACAAGAGTAAAGGCAGGGTAACTCGAATGCTAGCTGCTGAAACTGTGTATGCTATTTGGATGGAGAGAAACAAAATGAGATTCAATGACTTATGTACTCCTGCAGAGAAGTTGATTAAGGAGATTCAATTCTGTATATGTACTAGAGCAGATACTACTAATGTAATGATCAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217594.p1 GENE.S_Transcript_217594~~S_Transcript_217594.p1 ORF type:complete len:286 (-),score=36.95,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-16,zf-RVT|PF13966.2|3.1e+03 S_Transcript_217594:274-1131(-)
MKLVETTCRTFLWTGGCSLSKRALVAWERICLPRCAGGLNITNIHIWNRASLLKLHWDLANKKDKLWIQWVHIYYFKKRRFEFSAECKNACWMIQKIIRAGKYIQGICEWNDIVKKQKVSTREAYIKLLGRHQKVQWRKLIIGNAARPRAIFILWLALWGRLSTAERLQKMGISCPVECSFCNKDNESVNHVIFTCPWVQQIWRNMFQWIHLSFHADIQQKLINHSKHKSKGRVTRMLAAETVYAIWMERNKMRFNDLCTPAEKLIKEIQFCICTRADTTNVMIN*

Click here to download the sequence:
Link to NCBI Protein BLAST