Transcript Information: S_Transcript_217594.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1512102342908
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.12116699043826
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217594.p2 GENE.S_Transcript_217594~~S_Transcript_217594.p2 ORF type:5prime_partial len:176 (-),score=4.34,RVT_1|PF00078.23|5.1e-19 S_Transcript_217594:1521-2048(-)
ATATTAATGATGATGATATTAATAATGATGATGATGATGATAATAATAATAATGATCATGATGATGATAATAGTAACAATAACAATGACAATGACGACAATAACAACAACAATAATGATAGTTGTAGTAGTAGCAATAGTAATAGTAACTGAACTGGTGAAGGCCTATACTAGGAAAAACATATCCCCTAGATGTACTATTAAGGTTGACTTGCAAAAGGCTTATGATTCATTGGAGTGGCCCTTTCTTGAACGAATGTTGGTGGAACTGGGATTTCCCAATAAGTTCATTAAGTGGATTATGATCTGTGTCACCACTGTTTCTTATACTTTCAATATTAATGGGAATCTGACACTTCCTATCTCAGCCAAGAGAGGACTGAGGCAAGGGGATCCTTTATCCCCTTATTTGTTTGTAATCAGCATGGAATACCTTAACAGGTGCATGAAAGAGCTACATGATCAACCTGATTTCAATTTCCATCCTAGATGTCAAAGATTGGGTATAACACCTTTGTTTTGCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217594.p2 GENE.S_Transcript_217594~~S_Transcript_217594.p2 ORF type:5prime_partial len:176 (-),score=4.34,RVT_1|PF00078.23|5.1e-19 S_Transcript_217594:1521-2048(-)
ILMMMILIMMMMMIIIIMIMMMIIVTITMTMTTITTTIMIVVVVAIVIVTELVKAYTRKNISPRCTIKVDLQKAYDSLEWPFLERMLVELGFPNKFIKWIMICVTTVSYTFNINGNLTLPISAKRGLRQGDPLSPYLFVISMEYLNRCMKELHDQPDFNFHPRCQRLGITPLFCR*

Click here to download the sequence:
Link to NCBI Protein BLAST