Transcript Information: S_Transcript_217776.p1


Annotated TAIR IDAT1G23820.1
Annotated Gene Namespermidine synthase 1
Annotated Gene Symbol(s)SPDS1
Annotation TypeOrtholog
Chromosome Positionchr1:8420278-8422724 | Forward length=378
E-Value2.4E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.19475242298752
Replicate 20
Replicate 30.38933054986267
Condition 3: 24 Hour
Replicate 10.79798661152855
Replicate 20
Replicate 30.92135322027821


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217776.p1 GENE.S_Transcript_217776~~S_Transcript_217776.p1 ORF type:complete len:219 (+),score=41.67,Spermine_synth|PF01564.13|3.9e-60 S_Transcript_217776:197-853(+)
ATGGTTGTGAAGACTTCAACATATGGGAAGATTGTAGTCCTAAATGGTTCACTCCAGCTAAGTGAAAAAGATGAGTGTGCCTACCAAGAGATGATTACACACCTTCCTCTTTGCTCCATTCCTAATCCAAAAAAGTTACTGGCGATTGGGGGAGGAGATGGTGGAATTTTACGGGAAGCGTCGCGCCATCCTTCTTTGGAGCAGATTGACATATGTGAACTTGACAAAATGGTCATAGATGTGTATGAAAGGTTTTTTCCTGATATATTTCTTGGCTACAAAGATCCCCGAGTAAAGTTGCACCTTGATGATGGATTTGCCTTCGTGAAATCTGTTCCTCAAGGCACTTATGATGCTGTGATATTGGATGCCTTCCATATGATGGGGCCTGCTGCGGAAGAACTTGCTGATGAGAACTTCTTGGAAGCAATAGCAACAGCGCTCCGCCCAGGAGGCGTCCTATGTGCTCCTGCAGAAAGCTTCTGGATGACCGATTTGAGAATCCAAAACATTGTCTCAAAATGTAGAAAAACTTTCAAAGGATCTGTTAACTATGCTTGGACTACAGTTCCTACTTACCAAAGGCAAGTGTGCTCTTCATTGGCTCCCTTGTTGCAAATTGCACTCCATCCTTCACTAGTTGAAGGGAAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217776.p1 GENE.S_Transcript_217776~~S_Transcript_217776.p1 ORF type:complete len:219 (+),score=41.67,Spermine_synth|PF01564.13|3.9e-60 S_Transcript_217776:197-853(+)
MVVKTSTYGKIVVLNGSLQLSEKDECAYQEMITHLPLCSIPNPKKLLAIGGGDGGILREASRHPSLEQIDICELDKMVIDVYERFFPDIFLGYKDPRVKLHLDDGFAFVKSVPQGTYDAVILDAFHMMGPAAEELADENFLEAIATALRPGGVLCAPAESFWMTDLRIQNIVSKCRKTFKGSVNYAWTTVPTYQRQVCSSLAPLLQIALHPSLVEGKF*

Click here to download the sequence:
Link to NCBI Protein BLAST