Transcript Information: S_Transcript_217778.p1


Annotated TAIR IDAT1G23820.1
Annotated Gene Namespermidine synthase 1
Annotated Gene Symbol(s)SPDS1
Annotation TypeOrtholog
Chromosome Positionchr1:8420278-8422724 | Forward length=378
E-Value2E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0393104394774
Replicate 20.84531760756762
Replicate 31.6252219537273
Condition 2: 8 Hour
Replicate 10.98047771573025
Replicate 20.42857947585683
Replicate 31.3067186271253
Condition 3: 24 Hour
Replicate 10.41848435805736
Replicate 21.3025179066866
Replicate 30.57981711276129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217778.p1 GENE.S_Transcript_217778~~S_Transcript_217778.p1 ORF type:complete len:261 (+),score=51.91,Spermine_synth|PF01564.13|4e-64 S_Transcript_217778:197-979(+)
ATGGTTGTGAAGACTTCAACATATGGGAAGATTGTAGTCCTAAATGGTTCACTCCAGCTAAGTGAAAAAGATGAGTGTGCCTACCAAGAGATGATTACACACCTTCCTCTTTGCTCCATTCCTAATCCAAAAAAGTTACTGGCGATTGGGGGAGGAGATGGTGGAATTTTACGGGAAGCGTCGCGCCATCCTTCTTTGGAGCAGATTGACATATGTGAACTTGACAAAATGGTCATAGATGTGTATGAAAGGTTTTTTCCTGATATATTTCTTGGCTACAAAGATCCCCGAGTAAAGTTGCACCTTGATGATGGATTTGCCTTCGTGAAATCTGTTCCTCAAGGCACTTATGATGCTGTGATATTGGATGCCTTCCATATGATGGGGCCTGCTGCGGAAGAACTTGCTGATGAGAACTTCTTGGAAGCAATAGCAACAGCGCTCCGCCCAGGAGGCGTCCTATGTGCTCCTGCAGAAAGCTTCTGGATGACCGATTTGAGAATCCAAAACATTGTCTCAAAATGTAGAAAAACTTTCAAAGGATCTGTTAACTATGCTTGGACTACAGTTCCTACTTACCAAAGTGGTGTCATCGGGTACATGCTCTGCTCAACTGAAGGGCCACCAGTGGACTTCAAGCACCCAATAAACCCTTTAGATGAAAATGCAAATACTGGGATTGCAAACACACCACTGAAGTTCTATAACTCAGAGATGCACACTGCTGCATTCAGCTTGCCCCAGTTTGCAAAGGAGAACAGAGGTTCGCTGGACAAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217778.p1 GENE.S_Transcript_217778~~S_Transcript_217778.p1 ORF type:complete len:261 (+),score=51.91,Spermine_synth|PF01564.13|4e-64 S_Transcript_217778:197-979(+)
MVVKTSTYGKIVVLNGSLQLSEKDECAYQEMITHLPLCSIPNPKKLLAIGGGDGGILREASRHPSLEQIDICELDKMVIDVYERFFPDIFLGYKDPRVKLHLDDGFAFVKSVPQGTYDAVILDAFHMMGPAAEELADENFLEAIATALRPGGVLCAPAESFWMTDLRIQNIVSKCRKTFKGSVNYAWTTVPTYQSGVIGYMLCSTEGPPVDFKHPINPLDENANTGIANTPLKFYNSEMHTAAFSLPQFAKENRGSLDKN*

Click here to download the sequence:
Link to NCBI Protein BLAST