Transcript Information: S_Transcript_217779.p1


Annotated TAIR IDAT1G23820.1
Annotated Gene Namespermidine synthase 1
Annotated Gene Symbol(s)SPDS1
Annotation TypeHomolog
Chromosome Positionchr1:8420278-8422724 | Forward length=378
E-Value6E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11229114445224
Replicate 20.18618387812249
Replicate 30
Condition 2: 8 Hour
Replicate 10.35992219944528
Replicate 20.66077190075142
Replicate 30.35976114101234
Condition 3: 24 Hour
Replicate 10.92172504179722
Replicate 20.86065107251952
Replicate 30.31926638487489


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_217779.p1 GENE.S_Transcript_217779~~S_Transcript_217779.p1 ORF type:complete len:237 (+),score=46.00,Spermine_synth|PF01564.13|3.6e-37,Spermine_synth|PF01564.13|5.3e-14 S_Transcript_217779:197-907(+)
ATGGTTGTGAAGACTTCAACATATGGGAAGATTGTAGTCCTAAATGGTTCACTCCAGCTAAGTGAAAAAGATGAGTGTGCCTACCAAGAGATGATTACACACCTTCCTCTTTGCTCCATTCCTAATCCAAAAAAGTTACTGGCGATTGGGGGAGGAGATGGTGGAATTTTACGGGAAGCGTCGCGCCATCCTTCTTTGGAGCAGATTGACATATGTGAACTTGACAAAATGGTCATAGATGTGTATGAAAGGTTTTTTCCTGATATATTTCTTGGCTACAAAGATCCCCGAGTAAAGTTGCACCTTGATGATGGGCCTGCTGCGGAAGAACTTGCTGATGAGAACTTCTTGGAAGCAATAGCAACAGCGCTCCGCCCAGGAGGCGTCCTATGTGCTCCTGCAGAAAGCTTCTGGATGACCGATTTGAGAATCCAAAACATTGTCTCAAAATGTAGAAAAACTTTCAAAGGATCTGTTAACTATGCTTGGACTACAGTTCCTACTTACCAAAGTGGTGTCATCGGGTACATGCTCTGCTCAACTGAAGGGCCACCAGTGGACTTCAAGCACCCAATAAACCCTTTAGATGAAAATGCAAATACTGGGATTGCAAACACACCACTGAAGTTCTATAACTCAGAGATGCACACTGCTGCATTCAGCTTGCCCCAGTTTGCAAAGGAGAACAGAGGTTCGCTGGACAAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_217779.p1 GENE.S_Transcript_217779~~S_Transcript_217779.p1 ORF type:complete len:237 (+),score=46.00,Spermine_synth|PF01564.13|3.6e-37,Spermine_synth|PF01564.13|5.3e-14 S_Transcript_217779:197-907(+)
MVVKTSTYGKIVVLNGSLQLSEKDECAYQEMITHLPLCSIPNPKKLLAIGGGDGGILREASRHPSLEQIDICELDKMVIDVYERFFPDIFLGYKDPRVKLHLDDGPAAEELADENFLEAIATALRPGGVLCAPAESFWMTDLRIQNIVSKCRKTFKGSVNYAWTTVPTYQSGVIGYMLCSTEGPPVDFKHPINPLDENANTGIANTPLKFYNSEMHTAAFSLPQFAKENRGSLDKN*

Click here to download the sequence:
Link to NCBI Protein BLAST