Transcript Information: S_Transcript_218120.p1


Annotated TAIR IDAT3G18990.1
Annotated Gene NameAP2/B3-like transcriptional factor family protein
Annotated Gene Symbol(s)VRN1, REM39
Annotation TypeHomolog
Chromosome Positionchr3:6549077-6551568 | Reverse length=341
E-Value4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.144201238938
Replicate 30.24108151743269
Condition 2: 8 Hour
Replicate 10
Replicate 20.73110616469695
Replicate 30.41795779617611
Condition 3: 24 Hour
Replicate 10.28555403255679
Replicate 20.88877692456264
Replicate 30.32969992686426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218120.p1 GENE.S_Transcript_218120~~S_Transcript_218120.p1 ORF type:5prime_partial len:153 (+),score=17.50,B3|PF02362.17|3.7e-09 S_Transcript_218120:1-459(+)
ATCCCAAAGGTATTCGCACATAGGTTTGCTGGTGAACTTTCTACTACTTCCACCTTTACCGTTCCTACAGGCGAATCCTGGAATGTGGCATTAGTCAAAGAGGATAATGAGCTATGGTTCCAGAAAGGATGGCAAGAATTTGTGGAACACTTCTCCATAAGCTATGCATACTTTCTGCTGTTCATCTATGGAGGGAATTCGAATTTTGATGTCCACATATTCAATCTAACAGGTTGTGAGATATGGTACCCATCTAATGCTTGCAATGGTCCTCGGGAATCAAACAAGCCTCACTATGTTGAGGAACAAGCAGAAGCTCCTTACAACAAGTCGGTATGCTTCCCATTAAATAATCAGGGTCTAGATCATGATGGTGGTACTGAAGTACCATCAAATATTAAAGATATAACTGTAATAGAAATAGATAGTGAACACGAGCCTTCTTTGTTTGGGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218120.p1 GENE.S_Transcript_218120~~S_Transcript_218120.p1 ORF type:5prime_partial len:153 (+),score=17.50,B3|PF02362.17|3.7e-09 S_Transcript_218120:1-459(+)
IPKVFAHRFAGELSTTSTFTVPTGESWNVALVKEDNELWFQKGWQEFVEHFSISYAYFLLFIYGGNSNFDVHIFNLTGCEIWYPSNACNGPRESNKPHYVEEQAEAPYNKSVCFPLNNQGLDHDGGTEVPSNIKDITVIEIDSEHEPSLFGY*

Click here to download the sequence:
Link to NCBI Protein BLAST