Transcript Information: S_Transcript_218207.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8640584816617
Replicate 20.71632433628295
Replicate 30.95806421213509
Condition 2: 8 Hour
Replicate 10.90009764325561
Replicate 20.50845110544833
Replicate 30.62286567676894
Condition 3: 24 Hour
Replicate 10.14184989279607
Replicate 20.44150282291586
Replicate 30.49133852737239


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218207.p1 GENE.S_Transcript_218207~~S_Transcript_218207.p1 ORF type:3prime_partial len:308 (+),score=31.36,gag_pre-integrs|PF13976.2|1.3e+03,gag_pre-integrs|PF13976.2|4.5e-15 S_Transcript_218207:237-1157(+)
ATGGTTCCCAATTGGTTCATGCCACCATCCCGTTTTGCTCCTACCTGTGCTCCTTCCTTGCCGCCTGCCCCGCAACAACAAGGCATTCTTGGTGCTGCACCGCGTCCTGCCTACCCGACAGCAAACTTGGCTCAATTTGGGGTTCATGTACCTCCTTCAACCGCTGCGTCTACTGCCGCTGCACCCTATTACCAGCCCACATCTGATGTCTTAAATGCCTTCAACACTATGTCACTACATGAGCCACAAGATGCCTCATGGTATATGGATTCCGGTGCCACTGCACATCTGACTAATAATCCAGGTAATCTCTCTCATATTTTTAATTTTGGCATTAATTCATCTTCTCCTAATATGGTCACAGTTGCTAATGGAACCACAATCCCAATATCCCTCTCTGGCAGTCATGCCTTCTCCAGTATTACTCGCCCTCTCTATCTTAGTCATGTCTTGGTTACCCCCAACATACTTAAGAATCTCATCTCTGTTCGCAAATTTACCAAAGACAATAAATGTTCCATTGAGTTTGATCCTTCTGGTTTTTCTGTGAAGGACCTCCAGACACGTCAGACGTTGCTCAGATGTGATAGTGATGGCGACCTCTACCCTGTCCTGCCGTCTTCCATCCCTTGCTCATCTGCTCCTACTGCTCTCCTCACTACCACTTCCACTCTTTGGCATCAACGTTTGGGCCATCCTAGCAATCCTACTCTCAAGACTTTAGTTTCTAGAGGTTTTATCACATGTAATAAGGAGCCTACCTCCACTCTTTGTCATGCTTGTCAATTAGGAAAACATGTGAAATTTTCATTTCAATTGTCCACTACTAAATGTAATTCTCCCTTTGATGTCATTCATTCGGATTTGTGGACATCTCCCGTTGCTAGTAATTCAGGCATTAAATATTATTTAGTAAAAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218207.p1 GENE.S_Transcript_218207~~S_Transcript_218207.p1 ORF type:3prime_partial len:308 (+),score=31.36,gag_pre-integrs|PF13976.2|1.3e+03,gag_pre-integrs|PF13976.2|4.5e-15 S_Transcript_218207:237-1157(+)
MVPNWFMPPSRFAPTCAPSLPPAPQQQGILGAAPRPAYPTANLAQFGVHVPPSTAASTAAAPYYQPTSDVLNAFNTMSLHEPQDASWYMDSGATAHLTNNPGNLSHIFNFGINSSSPNMVTVANGTTIPISLSGSHAFSSITRPLYLSHVLVTPNILKNLISVRKFTKDNKCSIEFDPSGFSVKDLQTRQTLLRCDSDGDLYPVLPSSIPCSSAPTALLTTTSTLWHQRLGHPSNPTLKTLVSRGFITCNKEPTSTLCHACQLGKHVKFSFQLSTTKCNSPFDVIHSDLWTSPVASNSGIKYYLVKK

Click here to download the sequence:
Link to NCBI Protein BLAST