Transcript Information: S_Transcript_218258.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value8E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8369189133949
Replicate 23.1358279574133
Replicate 32.4340666912366
Condition 2: 8 Hour
Replicate 12.7062678067428
Replicate 21.5898775683054
Replicate 32.3804499863431
Condition 3: 24 Hour
Replicate 13.4375197370986
Replicate 22.4159393050929
Replicate 31.9204602338921


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218258.p1 GENE.S_Transcript_218258~~S_Transcript_218258.p1 ORF type:3prime_partial len:197 (-),score=24.78,RVT_1|PF00078.23|3e-18 S_Transcript_218258:3-590(-)
ATGCTGTTTTTTGGAATGAAGATTGAAGACAAAAGGCAATGCTTATGTTGTACATCAGGGTGTACATTCTCGGTACTTGTTAATGGGGCCCCCAGAGACTGGTTTTCCTCTTCCCGGGGTTTGAGGCAGGGGGACCCTCTATCCCCTTTTCTTTTCACCTTGGTGGTAGACGTCTTGAGTCGTATGATAGATAGGGGGGTGGAGGTAGGGGAAGTGGAGTGTTTTAGAGTCGGGAGGGAAGGTATCTCTGTCTCCCATCTTCAGTTTGCAGATGATACTATTCTTTTCCTCTCTGCAAGCCATGAGGTCCTTCGCAAGGTCCTTACCCTCCTGCAGATTTTTGAGTTGGTTTCAGGTTTGCGGGTTAACCTTTCTAAGTGTGGTCTAGCTGGCATTAATGTGGATGAGGGATTTTTGGAATGTCTTGCTAGGGAGGTGGGTTGTGTGGTTCAACATTGGCCTGTTACCTATCTAGGCCTTCCTTTGGGGGGTAATCCTAGGGCAGCGTCTTTCTGGGATCTTGTGGTGTCTAGAGTTGCTAAGCGACTGGATGGTTGGAAGGGGAGGTACTTTTCGCTAGGTGGTCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218258.p1 GENE.S_Transcript_218258~~S_Transcript_218258.p1 ORF type:3prime_partial len:197 (-),score=24.78,RVT_1|PF00078.23|3e-18 S_Transcript_218258:3-590(-)
MLFFGMKIEDKRQCLCCTSGCTFSVLVNGAPRDWFSSSRGLRQGDPLSPFLFTLVVDVLSRMIDRGVEVGEVECFRVGREGISVSHLQFADDTILFLSASHEVLRKVLTLLQIFELVSGLRVNLSKCGLAGINVDEGFLECLAREVGCVVQHWPVTYLGLPLGGNPRAASFWDLVVSRVAKRLDGWKGRYFSLGGR

Click here to download the sequence:
Link to NCBI Protein BLAST