Transcript Information: S_Transcript_218314.p1


Annotated TAIR IDAT5G55060.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22342079-22346400 | Forward length=662
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87735168907188
Replicate 21.8183617767183
Replicate 31.0133371474506
Condition 2: 8 Hour
Replicate 11.5232421655095
Replicate 21.7209114338251
Replicate 31.1712004178561
Condition 3: 24 Hour
Replicate 11.4403219883908
Replicate 21.3697908095595
Replicate 31.1086612925326


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218314.p1 GENE.S_Transcript_218314~~S_Transcript_218314.p1 ORF type:3prime_partial len:182 (-),score=27.23 S_Transcript_218314:3-545(-)
ATGAGGATGGACTTTCTTGACAATCATCCCTTGGTGATCTTTCACTTCCATTGTAATATTTGCAAGATATTCGCAGAGGGACTTACTCCTAGTAGGAAGGTTGGCTTTCTTGTGGAAACACTTCCTGGCTCAATAACTTTGCCGAGGGACATTCATGGTGCTCCAGCTGAAAGCTTGGTTGTTAAAGTATCTGAAGTCATTGGAAGCTTCAAAACGCTGCGGAAGATGGCTATATTTTGGTGCAGATTTGTTGCTGAAATCAGAAGACTTTGGTTGGAAGAGCAATATGTAGCTGGCATTCCCGTCGAGGAATTACCGGATTTAAATTGCTGTCTACTGTATCAGCAGTTGCAACTTATAAATTGTTGTGTTTCTCGGAAGAAGCACCGTGCCATAGCTACCGATTCACTAGAATCTTTAATTAGAGAAGCTGGTTGTGATGCTGACGGCGTGCCTTCATCAATGGAAAGAATAACTTCAGGTTCTTTTCCTCATGCTAAAACACTCACAGGGGAAGTTGTTCTACGGTTAGGAGCAAGTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218314.p1 GENE.S_Transcript_218314~~S_Transcript_218314.p1 ORF type:3prime_partial len:182 (-),score=27.23 S_Transcript_218314:3-545(-)
MRMDFLDNHPLVIFHFHCNICKIFAEGLTPSRKVGFLVETLPGSITLPRDIHGAPAESLVVKVSEVIGSFKTLRKMAIFWCRFVAEIRRLWLEEQYVAGIPVEELPDLNCCLLYQQLQLINCCVSRKKHRAIATDSLESLIREAGCDADGVPSSMERITSGSFPHAKTLTGEVVLRLGASQ

Click here to download the sequence:
Link to NCBI Protein BLAST