Transcript Information: S_Transcript_218315.p1


Annotated TAIR IDAT5G55060.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22342079-22346400 | Forward length=662
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99487855084787
Replicate 21.6495543594404
Replicate 32.4130682726206
Condition 2: 8 Hour
Replicate 10.5979081397327
Replicate 21.4635788829728
Replicate 30.59764058705555
Condition 3: 24 Hour
Replicate 11.6332623170538
Replicate 20.84724529257373
Replicate 30.70716012350793


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218315.p1 GENE.S_Transcript_218315~~S_Transcript_218315.p1 ORF type:internal len:107 (-),score=26.17 S_Transcript_218315:1-318(-)
GAGGAAAAAGTTACCTCCGATTTGGGCGACGATGAAGTTTGGACTTTTATCCAGTCTATACTCGATGCTGAGGGACTTACTCCTAGTAGGAAGGTTGGCTTTCTTTTGGAAACACTTCCTGGCTTAATAACTTTGCCAAGAGACATTCATGGTGCTCCAGCTGAAAGCTTGGTTGTTAAAGTATCTGAAGTCATTGGAAGCTTCAAAACGCTGCAGAAGATGGCTGTATTTTGGTGCAGGTTTGTTGCTGAAATCAGAAGATGGCTGTATTTTGGTGCAGGTTTGTTGCTGAAATCAGAAGATGGCTGTATTTTGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218315.p1 GENE.S_Transcript_218315~~S_Transcript_218315.p1 ORF type:internal len:107 (-),score=26.17 S_Transcript_218315:1-318(-)
EEKVTSDLGDDEVWTFIQSILDAEGLTPSRKVGFLLETLPGLITLPRDIHGAPAESLVVKVSEVIGSFKTLQKMAVFWCRFVAEIRRWLYFGAGLLLKSEDGCILV

Click here to download the sequence:
Link to NCBI Protein BLAST