Transcript Information: S_Transcript_218420.p1


Annotated TAIR IDAT5G62550.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25105839-25107875 | Reverse length=487
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.091397937484
Replicate 24.6592226394752
Replicate 34.811148543548
Condition 2: 8 Hour
Replicate 16.092968662038
Replicate 25.975090009368
Replicate 35.2958627590016
Condition 3: 24 Hour
Replicate 16.2413952830269
Replicate 26.7569127681036
Replicate 35.7963704533497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218420.p1 GENE.S_Transcript_218420~~S_Transcript_218420.p1 ORF type:internal len:161 (-),score=33.90 S_Transcript_218420:2-481(-)
AAGTGTGATACACCGCGTTCTGATGTTTCCAAATCATCTACTCGTCGAAAGTTCAATGTCCTGTCATCATCATCCTATTGGCTACAACAAATTAAGCTTTCAGAGTCTGCTTCCAAACACTCTCTTTCACTTGCCTTCTTCAAACTTGCCCTGGAGGCTGGAAGTGAGCCTCTGCAGCTACTGCGTGAGGAGCTAAAATCATATGTAAGGAGGCACAATCTTGCTGATTATGGAGACACTATCAGAGACTTAAATAACAGCTACGAAATATCAGATACCTTGGAACAGTTACAGGTATCTGAGACCTGCTCTCATGTGCCTGAAGGAGCAAGTAGTGTCTCTGATGAGAGCGCCACTTCTACAGCAGATACTAGGAAGCTCAAACCAAAATCATTGAACACCGATGCTCAGACGTCTTCAGCCAAAGTATCTTCCAGGAAGGACAATGCTCAGAGAACCACTGCAGTGGTTAAGACCAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218420.p1 GENE.S_Transcript_218420~~S_Transcript_218420.p1 ORF type:internal len:161 (-),score=33.90 S_Transcript_218420:2-481(-)
KCDTPRSDVSKSSTRRKFNVLSSSSYWLQQIKLSESASKHSLSLAFFKLALEAGSEPLQLLREELKSYVRRHNLADYGDTIRDLNNSYEISDTLEQLQVSETCSHVPEGASSVSDESATSTADTRKLKPKSLNTDAQTSSAKVSSRKDNAQRTTAVVKTR

Click here to download the sequence:
Link to NCBI Protein BLAST