Transcript Information: S_Transcript_218570.p1


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value4.4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64909759110196
Replicate 20.26905840923799
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.27282742243569
Replicate 31.0397974441454
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218570.p1 GENE.S_Transcript_218570~~S_Transcript_218570.p1 ORF type:5prime_partial len:82 (+),score=-6.30,Sec63|PF02889.12|6.5e-08 S_Transcript_218570:1-246(+)
CAAAGTATACGTATAATCCAGGCCATGATAGATATATGCGCTAATAGTGGATGGCTGTCAAGCACGATTATGTGTATGCATCTCTTACAAATGGTTATGCAGGTATATTCCTTGTACTTCTATTTATCCAGCTACTATGCAATTTTATGGTTTAGCTTGTCAAAACTGTACAACTATGTGTCCGCAATGCTTTTGTTGAAATTCATATGTATCTGTTTCCTTTATTCCAAGTTTAATTACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218570.p1 GENE.S_Transcript_218570~~S_Transcript_218570.p1 ORF type:5prime_partial len:82 (+),score=-6.30,Sec63|PF02889.12|6.5e-08 S_Transcript_218570:1-246(+)
QSIRIIQAMIDICANSGWLSSTIMCMHLLQMVMQVYSLYFYLSSYYAILWFSLSKLYNYVSAMLLLKFICICFLYSKFNYK*

Click here to download the sequence:
Link to NCBI Protein BLAST