Transcript Information: S_Transcript_218577.p1


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2096818743264
Replicate 21.0028540707961
Replicate 30.20957654640455
Condition 2: 8 Hour
Replicate 10.72700194262953
Replicate 22.0338044217933
Replicate 30.72667662289709
Condition 3: 24 Hour
Replicate 10.74471193717935
Replicate 20.25754331336758
Replicate 30.85984242290168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218577.p1 GENE.S_Transcript_218577~~S_Transcript_218577.p1 ORF type:3prime_partial len:88 (+),score=4.19 S_Transcript_218577:977-1237(+)
ATGTTGAAGTTACCATGTCTCAGCCACCCCTTCTCGCACTCAATCACTTGCTCTTGCTCTCATCATACTGGTCCCATTGGGAGTGTTGCCTGTGCCTGGTGTAATACTATTGCCGAAAGAAGCTCTGGTTTTGTCTTTGTCAATAGCTTTGCTTTTTTACATTACAAATTTGTCTCTTGGCAGATGGTTAATCCAGCATACTATGGTTTAGAAGATACCAGTCCAGGGTTCATAAGTTCATACTTGTCAAGGTTGGTGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218577.p1 GENE.S_Transcript_218577~~S_Transcript_218577.p1 ORF type:3prime_partial len:88 (+),score=4.19 S_Transcript_218577:977-1237(+)
MLKLPCLSHPFSHSITCSCSHHTGPIGSVACAWCNTIAERSSGFVFVNSFAFLHYKFVSWQMVNPAYYGLEDTSPGFISSYLSRLVQ

Click here to download the sequence:
Link to NCBI Protein BLAST