Transcript Information: S_Transcript_218750.p1


Annotated TAIR IDAT1G02330.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:462202-463521 | Reverse length=279
E-Value2.3E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.384327484978
Replicate 235.449201199153
Replicate 334.467885040137
Condition 2: 8 Hour
Replicate 132.746854045036
Replicate 237.956731961783
Replicate 333.929719970476
Condition 3: 24 Hour
Replicate 126.999294201858
Replicate 228.520751646639
Replicate 325.222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218750.p1 GENE.S_Transcript_218750~~S_Transcript_218750.p1 ORF type:complete len:267 (-),score=77.68,Hep_59|PF07052.7|1.2e+03,Hep_59|PF07052.7|9.6e-27,Hep_59|PF07052.7|4.6e+03 S_Transcript_218750:199-999(-)
ATGCCAAAGAACTTTAGGAAAAGAAAAATTGATGACAATGATGAGGCGAATAATGTTTCAGATGATGGAGAGGAAAGAAGGTTGGCATTAGAGGAGGTGAAATTACTGCAAAAGCAGAGGGAGAGAAGATCAGGCATCGCTGCTAACACCATACCACCACAGTCATCAGCTGTCGTTGCTAAGTTAGGCGAACATAAAGTCGAGGTTGATGGAGAGAAAGAAGAGTTAGTTTTGCAGGATACATTTGCACAGGAAACCGCTGTCATGGTTGAAGACCCTAACATGTTAAAGTTTATTGAACAAGAGTTGGCCAAGAAGAGGGGGAAGGGCATTGATGCTACAGATCGTTCAGAGAATGAATTGAAACATGCAGAAGATGAGTTGTACAAGATACCAGATCATCTGAAGGTGAAAAAGCGAAACTCAGAAGAAAGCTCTACTCAGTGGACCACTGGGATTGCAGAAGTTCAGCTTCCCATTGAATACAAGCTGAAAAATATCGAGGAAACAGAACAAGCGAAGAAGCTTCTTCACGAGAAGAAATTTATGGCTCCGCCCAAGACAGAGTCAATCAGTCCTTGGAGTCACAATGCTGATTATTTGCAACGTGGGAAGGATTATGCTGAAAAACTTAGGAGAGAACATCCAGAACTTTACAAGGATAGAGGCACAGAGGATAATGGCATGGCATCAAGGCCCAGCGAAAATGGCGCAGACGCTGGGAGAAGGCTAGCTGCCACAGATGAGTTTATGCTTGAGCGGTTCCGGAAACGAGAACGTCAGCGGGTGATGAGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218750.p1 GENE.S_Transcript_218750~~S_Transcript_218750.p1 ORF type:complete len:267 (-),score=77.68,Hep_59|PF07052.7|1.2e+03,Hep_59|PF07052.7|9.6e-27,Hep_59|PF07052.7|4.6e+03 S_Transcript_218750:199-999(-)
MPKNFRKRKIDDNDEANNVSDDGEERRLALEEVKLLQKQRERRSGIAANTIPPQSSAVVAKLGEHKVEVDGEKEELVLQDTFAQETAVMVEDPNMLKFIEQELAKKRGKGIDATDRSENELKHAEDELYKIPDHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEQAKKLLHEKKFMAPPKTESISPWSHNADYLQRGKDYAEKLRREHPELYKDRGTEDNGMASRPSENGADAGRRLAATDEFMLERFRKRERQRVMRR*

Click here to download the sequence:
Link to NCBI Protein BLAST