Transcript Information: S_Transcript_218932.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value1.3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64127713819712
Replicate 20
Replicate 30.22220163956145
Condition 2: 8 Hour
Replicate 10.25693241345943
Replicate 20.53908069011389
Replicate 30
Condition 3: 24 Hour
Replicate 11.0527654694262
Replicate 20
Replicate 31.5194002653684


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218932.p1 GENE.S_Transcript_218932~~S_Transcript_218932.p1 ORF type:5prime_partial len:83 (+),score=9.91 S_Transcript_218932:1-249(+)
TTCAACATGAAATCTGGTCTTGCTTCTCAAAGAAAACTATCTGGATCTGCTGTGGACTTTCCTAGAATCAATGAAAACTACACTGGAAGGTACTTGGTAGTTTGTAGGTTAAATAATGAAATGATGTTTAAAAAATCCTCTTTGCCAAATCAAATTTCGACAACATTGGAGTTTCAGAAAATATCTCCTTCCCTTAAAGAAGTCCCCATTTACTATTTTATGCTCAAACTTCACAAACTTAAATTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218932.p1 GENE.S_Transcript_218932~~S_Transcript_218932.p1 ORF type:5prime_partial len:83 (+),score=9.91 S_Transcript_218932:1-249(+)
FNMKSGLASQRKLSGSAVDFPRINENYTGRYLVVCRLNNEMMFKKSSLPNQISTTLEFQKISPSLKEVPIYYFMLKLHKLKL*

Click here to download the sequence:
Link to NCBI Protein BLAST