Transcript Information: S_Transcript_218933.p2


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value1.3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32063856909856
Replicate 20.79745022497041
Replicate 30.66660491868436
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.51363488204774
Condition 3: 24 Hour
Replicate 10.26319136735656
Replicate 20.27305797079937
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218933.p2 GENE.S_Transcript_218933~~S_Transcript_218933.p2 ORF type:5prime_partial len:83 (+),score=9.38 S_Transcript_218933:1-249(+)
TTCAACATGAAATCTGGTCTTGCTTCTCAAAGAAAACTATCTGGATCTGCTGTGGACTTTCCTAGAATCAATGAAAACTACACTGGAAGGTACTTGGTAGTTTGTAGGTTAAATAATGAAATGATGTTTAAAAAATCCTCTTTGCAAAATCAAATTTCGATAACATTGGAGTTTCAGAAAATACCTACTTCCTCCATCCCTCAAAGAAGTCCCCGTTTACTATTTTATGGTCAAACTTCACAAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218933.p2 GENE.S_Transcript_218933~~S_Transcript_218933.p2 ORF type:5prime_partial len:83 (+),score=9.38 S_Transcript_218933:1-249(+)
FNMKSGLASQRKLSGSAVDFPRINENYTGRYLVVCRLNNEMMFKKSSLQNQISITLEFQKIPTSSIPQRSPRLLFYGQTSQT*

Click here to download the sequence:
Link to NCBI Protein BLAST