Transcript Information: S_Transcript_218942.p3


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value3.9E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8263824377085
Replicate 20.86520743362803
Replicate 30
Condition 2: 8 Hour
Replicate 10.41814490817908
Replicate 20.65799554822725
Replicate 30.41795779617611
Condition 3: 24 Hour
Replicate 10.85666209767036
Replicate 20.88877692456264
Replicate 31.9781995611856


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218942.p3 GENE.S_Transcript_218942~~S_Transcript_218942.p3 ORF type:complete len:102 (-),score=15.79,Transket_pyr|PF02779.20|3.7e-18 S_Transcript_218942:56-361(-)
ATGCTCATAATGGGTATGCAGGTGGTGCATGATGTAGATCTCCAAAGACTGCCCGTCAGATTTGCCATGGATAGAGCCGGTTTAGTGGGTGCAGATGGACCAACCCACTGTGGTGCGTTTGATATCACCTACATGGCTTGTTTGCCAAATATGATTGTTATGGCTCCATCAGATGAAGCAGAGCTGATGCACATGGTTGCAACAGCGACAGCTATAGATGACAGGCCAAGCTGCTTCAGATACCCAAGGGGGAAGGGGATAGGAGTATCCCTTCCACACTTTAGTTATATTAGTAAAAATGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218942.p3 GENE.S_Transcript_218942~~S_Transcript_218942.p3 ORF type:complete len:102 (-),score=15.79,Transket_pyr|PF02779.20|3.7e-18 S_Transcript_218942:56-361(-)
MLIMGMQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPSDEAELMHMVATATAIDDRPSCFRYPRGKGIGVSLPHFSYISKNG*

Click here to download the sequence:
Link to NCBI Protein BLAST