Transcript Information: S_Transcript_218945.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value1.3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.008528395108
Replicate 21.3529069068287
Replicate 30.9569344194321
Condition 2: 8 Hour
Replicate 11.2070975651207
Replicate 21.0552758792324
Replicate 31.7092896664372
Condition 3: 24 Hour
Replicate 12.369963774923
Replicate 20.9621429442789
Replicate 31.189719075713


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218945.p1 GENE.S_Transcript_218945~~S_Transcript_218945.p1 ORF type:complete len:212 (-),score=37.80,DXP_synthase_N|PF13292.2|1.3e-87,E1_dh|PF00676.16|3.5e-08,TPP_enzyme_C|PF02775.17|5.4e+03,TPP_enzyme_C|PF02775.17|8.7e-06,Transketolase_N|PF00456.17|1.1e-05 S_Transcript_218945:1005-1640(-)
ATGTCTTTTCAGGATCTTGCACAGCTAGCAGCAGAGCTTAGAGCAGAAATGGTATATGCAGTGGCAAAAACAGGTGGGCACTTGGGCGCAAGCTTGGGGGTAGTGGAGCTAACAGTGGCCCTGCACCATGTCTTTAACACACCTGACGACAGAATCATTTGGGATGTTGGTCATCAGGCATATCCACACAAAATTCTAACGGGACGAAGATCTAAGATGCAAACAATAAGGAAGACCTCAGGACTTGCAGGGTTTCCAAAAAGAGATGAAAGTATATATGATGCTTTTGGTACAGGGCATAGTTCAACTAGCATATCTGCTGGTCTTGGCATGGCAGTTGCGAGAGACCTTTTAGGAAAAAAGAACAATGTTATTTCAGTGATTGGGGATGGAGCGATGACTGCAGGACAGGCATATGAGGCTTTAAATAATGCAGGGTACCTTGACACTAACCTCATTGTCATACTGAATGACAATAAGCAAGTTTCTTTGCCCACCGCAACTCTTGATGGGCCTGCAACTCCTGTTGGAGCACTCAGCAGCGCTCTTTCAAAGCTCCAAGCAAGTCCCAAATTCCGAAAACTTCGGGAAGCGGCCAAGGTAGATATCACCCCCAGTCAACTCCATAGTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218945.p1 GENE.S_Transcript_218945~~S_Transcript_218945.p1 ORF type:complete len:212 (-),score=37.80,DXP_synthase_N|PF13292.2|1.3e-87,E1_dh|PF00676.16|3.5e-08,TPP_enzyme_C|PF02775.17|5.4e+03,TPP_enzyme_C|PF02775.17|8.7e-06,Transketolase_N|PF00456.17|1.1e-05 S_Transcript_218945:1005-1640(-)
MSFQDLAQLAAELRAEMVYAVAKTGGHLGASLGVVELTVALHHVFNTPDDRIIWDVGHQAYPHKILTGRRSKMQTIRKTSGLAGFPKRDESIYDAFGTGHSSTSISAGLGMAVARDLLGKKNNVISVIGDGAMTAGQAYEALNNAGYLDTNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASPKFRKLREAAKVDITPSQLHSV*

Click here to download the sequence:
Link to NCBI Protein BLAST