Transcript Information: S_Transcript_218946.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value4.5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51178848529193
Replicate 20.63642662185139
Replicate 30.53200200241156
Condition 2: 8 Hour
Replicate 10.20505182997243
Replicate 20.21511392922814
Replicate 31.2297604387489
Condition 3: 24 Hour
Replicate 11.890422609763
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218946.p1 GENE.S_Transcript_218946~~S_Transcript_218946.p1 ORF type:5prime_partial len:104 (-),score=20.99,DXP_synthase_N|PF13292.2|1.6e-13 S_Transcript_218946:361-672(-)
AAGGTTGCAGCAAAAGTGGATGAATATGCAAGAGGCATGATCGGTGGTACAGGATCTACACTATTTGAAGAACTTGGTTTGTACTACATTGGGCCTGTGGATGGGCATAACATAGATGACCTGATCACAATATTAAAGCAAGTCAAAGAAATGCCAGCACCAGGGCCAGTTTTAATTCACACAGTCACTGAGAAAGGGAAGGGCTACCCACCAGCAGAGGCAGCATCCGACAGAATGCATGGTGGATCTGAAAACCAAAACCGTCTTCCTCCCCATAAGACAAAACACATTTGCTTGAAATTATATATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218946.p1 GENE.S_Transcript_218946~~S_Transcript_218946.p1 ORF type:5prime_partial len:104 (-),score=20.99,DXP_synthase_N|PF13292.2|1.6e-13 S_Transcript_218946:361-672(-)
KVAAKVDEYARGMIGGTGSTLFEELGLYYIGPVDGHNIDDLITILKQVKEMPAPGPVLIHTVTEKGKGYPPAEAASDRMHGGSENQNRLPPHKTKHICLKLYI*

Click here to download the sequence:
Link to NCBI Protein BLAST