Transcript Information: S_Transcript_218947.p2


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value9.8E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.37744053658643
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218947.p2 GENE.S_Transcript_218947~~S_Transcript_218947.p2 ORF type:complete len:113 (-),score=21.22,DXP_synthase_N|PF13292.2|4.8e-26,E1_dh|PF00676.16|7.4e-07 S_Transcript_218947:1005-1343(-)
ATGTCATGGAAAAACAACTTAACATTTGCAGGCATGGCAGTTGCGAGAGACCTTTTAGGAAAAAAGAACAATGTTATTTCAGTGATTGGGGATGGAGCGATGACTGCAGGACAGGCATATGAGGCTTTAAATAATGCAGGGTACCTTGACACTAACCTCATTGTCATACTGAATGACAATAAGCAAGTTTCTTTGCCCACCGCAACTCTTGATGGGCCTGCAACTCCTGTTGGAGCACTCAGCAGCGCTCTTTCAAAGCTCCAAGCAAGTCCCAAATTCCGAAAACTTCGGGAAGCGGCCAAGGTAGATATCACCCCCAGTCAACTCCATAGTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218947.p2 GENE.S_Transcript_218947~~S_Transcript_218947.p2 ORF type:complete len:113 (-),score=21.22,DXP_synthase_N|PF13292.2|4.8e-26,E1_dh|PF00676.16|7.4e-07 S_Transcript_218947:1005-1343(-)
MSWKNNLTFAGMAVARDLLGKKNNVISVIGDGAMTAGQAYEALNNAGYLDTNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASPKFRKLREAAKVDITPSQLHSV*

Click here to download the sequence:
Link to NCBI Protein BLAST