Transcript Information: S_Transcript_218951.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value2.5E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40527413048498
Replicate 22.5758586793038
Replicate 30.65532564764063
Condition 2: 8 Hour
Replicate 10.9742564104274
Replicate 20.34068805035117
Replicate 30.54101136053252
Condition 3: 24 Hour
Replicate 12.2177546690959
Replicate 21.3805367457674
Replicate 30.76818409355684


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218951.p1 GENE.S_Transcript_218951~~S_Transcript_218951.p1 ORF type:5prime_partial len:197 (-),score=41.25,Transket_pyr|PF02779.20|1.7e-20,DXP_synthase_N|PF13292.2|7e-13 S_Transcript_218951:808-1398(-)
AAGGTTGCAGCAAAAGTGGATGAATATGCAAGAGGCATGATCGGTGGTACAGGATCTACACTATTTGAAGAACTTGGTTTGTACTACATTGGGCCTGTGGATGGGCATAACATAGATGACCTGATCACAATATTAAAGCAAGTCAAAGAAATGCCAGCACCAGGGCCAGTTTTAATTCACACAGTCACTGAGAAAGGGAAGGGCTACCCACCAGCAGAGGCAGCATCTGACAGAATGCATGGTGTCGTAAAGTTCAACCCAGAATCAGGAAAGCAGTTCAAACCCAAATCCCCTACACTTTCATATACAGAATACTTTGCTCAGGCTTTAACAAAAGAAGCGGAGGTAGATGAGAAGATTGTGGCTCTTCATGCTGCAATGGGTGGTGGAACAGGTCTAAACTACTTCCAGAAGAGATTTCCCAATCGTTGCTTTGACGTGGGCATTGCCGAGCAGCATGCTGTAACATTTGCAGCAGGTCTGGCAACAGAGGGCCTCAAGCCTTTCTGCACCATCTACTCATCGTTTCTACAGCGAGGATATGATCAGGTGAGAACTTGTTCAGTTAATACTTTACAGTGCAGCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218951.p1 GENE.S_Transcript_218951~~S_Transcript_218951.p1 ORF type:5prime_partial len:197 (-),score=41.25,Transket_pyr|PF02779.20|1.7e-20,DXP_synthase_N|PF13292.2|7e-13 S_Transcript_218951:808-1398(-)
KVAAKVDEYARGMIGGTGSTLFEELGLYYIGPVDGHNIDDLITILKQVKEMPAPGPVLIHTVTEKGKGYPPAEAASDRMHGVVKFNPESGKQFKPKSPTLSYTEYFAQALTKEAEVDEKIVALHAAMGGGTGLNYFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCTIYSSFLQRGYDQVRTCSVNTLQCSW*

Click here to download the sequence:
Link to NCBI Protein BLAST