Transcript Information: S_Transcript_218951.p2


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value6.1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18857085091893
Replicate 30.31526044587351
Condition 2: 8 Hour
Replicate 10
Replicate 20.19121238153612
Replicate 30
Condition 3: 24 Hour
Replicate 11.3069588413176
Replicate 20.96853895625416
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_218951.p2 GENE.S_Transcript_218951~~S_Transcript_218951.p2 ORF type:complete len:117 (-),score=20.85,Transket_pyr|PF02779.20|9.9e-19 S_Transcript_218951:420-770(-)
ATGTGGATCTCCAGACTAATGCTTGTAATGGATATGCAGGTGGTGCATGATGTAGATCTCCAAAGACTGCCCGTCAGATTTGCCATGGATAGAGCCGGTTTAGTGGGTGCAGATGGACCAACCCACTGTGGTGCGTTTGATATCACCTACATGGCTTGTTTGCCAAATATGATTGTTATGGCTCCATCAGATGAAGCAGAGCTGATGCACATGGTTGCAACAGCGACAGCTATAGATGACAGGCCAAGCTGCTTCAGATACCCAAGGGGGAAGGGGATAGGAGTATCCCTTCCACCTGACAATAAAGGAACACCACTTGAGGTCAGCACAGAACAATCTCTTCAAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_218951.p2 GENE.S_Transcript_218951~~S_Transcript_218951.p2 ORF type:complete len:117 (-),score=20.85,Transket_pyr|PF02779.20|9.9e-19 S_Transcript_218951:420-770(-)
MWISRLMLVMDMQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPSDEAELMHMVATATAIDDRPSCFRYPRGKGIGVSLPPDNKGTPLEVSTEQSLQI*

Click here to download the sequence:
Link to NCBI Protein BLAST