Transcript Information: S_Transcript_219225.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.16924912950106
Replicate 20
Replicate 30.16917339369033
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219225.p1 GENE.S_Transcript_219225~~S_Transcript_219225.p1 ORF type:5prime_partial len:126 (-),score=24.10,RVT_1|PF00078.23|4.1e-21 S_Transcript_219225:865-1242(-)
GCTTCTTTGGTGGCTAATGAGGTCGTGGATGATGCTCGGAGGTCAGGTTTTGAGGGGGTGGTCTTCAAACTTGATTTTGAGAAGGCCTATGATAGGGTGAGTTGGTCGTTTCTTGACCGGGTGCTTCAGCGGAAGGGATTTGGGGAGAGGTGGCGACATTGGGTGAGGGGATGCTTTTCGAACACTGCTTTCTCTGTTTTGGTCAATGGTGCCCCACGGGAGTGGTTCTCCTCCTCCCGTGGGCTACGCCAAGGGGACCCCCTGTCTCCCTTTCTTTTTACTTTGGTGGTGGACGTGCTTAGTCGGATGTTGGAAAGGGCGGTGGATAGGGGAGAGGTGGAGGGTTTTGCGGTGGGTCGGGGGTGTCTCATTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219225.p1 GENE.S_Transcript_219225~~S_Transcript_219225.p1 ORF type:5prime_partial len:126 (-),score=24.10,RVT_1|PF00078.23|4.1e-21 S_Transcript_219225:865-1242(-)
ASLVANEVVDDARRSGFEGVVFKLDFEKAYDRVSWSFLDRVLQRKGFGERWRHWVRGCFSNTAFSVLVNGAPREWFSSSRGLRQGDPLSPFLFTLVVDVLSRMLERAVDRGEVEGFAVGRGCLIY*

Click here to download the sequence:
Link to NCBI Protein BLAST