Transcript Information: S_Transcript_219239.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value7E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.10552399804446
Condition 3: 24 Hour
Replicate 10
Replicate 20.11219708701162
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219239.p1 GENE.S_Transcript_219239~~S_Transcript_219239.p1 ORF type:internal len:404 (-),score=50.39,RVT_1|PF00078.23|3.6e-06 S_Transcript_219239:1-1209(-)
GGGGACCCCCTGTCTCCCTTTCGTTTTACTTTGGTGGTGGATGTGCTTAGTCGAATGTTGGAAAGGGCAATGGTAAGGGGAGTGGTGGAGGGTTTTGCGGTGGGTCGTGGAGGGACGCAGGTGTCTCATCTACAGTTTGCCGACGATACTATCCTGTTTCTGAAAGCGGATTTGCAGAGTTTCAAACATGTACTCACTATCCTGCAAGTGTTCGAGGTGATCTGGGTGAATTTGGGAAAGAGCAATGTAGCAGGGGTGAATATGAGTCACGGGATGATAGATTCTTTTGCTTCACTGGCTGGTTTCCAGACCCAGAGTTGGCCTCTTCTGTACCTGGGCGTCCCCCTCGGCGATAACCCACGAGCGGTTTCTTTTTGGGACCCGGTGGTGGATAGGGTTACTCGTCGACTGGAGGGGTGGAAGGGTGTTTACTTCTCCTTTGGTGGGCGCATTACTTTGCTGCAGTCGTGCTTGTCTAGTATCCCCCTGTATTTTTTATCCTTATTCCGCATTTCGAAGTCCGTGGCCCTGCAATTAGAGAAGTTGATGCGGGATTTCTTGTGGCATGGATCTTCGGGAGACAGGAGGGACCACCTGGTTGATTGGAACACGGTGTGCAAGCCGAAGGAAGATGGAGGACTGGGGGTAGGTAGGTTGGTGCTTCGGAATATTGCTCTTGTGGGTAAGTGGCTGTGGCGGTTTCCGATGGAAACTAACTCGCTCTGGCACATGGTGATTCGGAGCCGCTATGGGGATCCTGGTCTGGGGTGGGATGTTTTGGCGCCTTCGAGGTCTACCCACGCCGCCCCCTGGAAGTTTGTCTCCCAGGTGGCTGCTTTCTTCCTCCCTCAGGTGGAGCTGAAGTTAGGTAATGGGAGTAGAATTCGTTTTTGGGAGGATGTGTGGAGGGGTGATGGGTCTTTCATGGAGCGGTTTCCCCGCATGTATCGTCTCTCTGCTCTTCATGAGGCCACTGTGGCCCAATTCTTCAATGGAGGGGGCTGGAATCTGCATCTGCGGAGGTCAGTCAGGGATTTGGAACTGGATGAGTTATCTTCTCTCTTCGAAGCTCTGGAGGGGGTGTTGTTCTCTGATTTGGAGGATAAACGGATTTGGAAAGCGGATACCCATGGGGTCTTCTCTTGTGCTTCTTTCCTGCGTTCCCTGCAAGGTCATTCAGGTGGCCCCACATTTCCCATTGCTCGGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219239.p1 GENE.S_Transcript_219239~~S_Transcript_219239.p1 ORF type:internal len:404 (-),score=50.39,RVT_1|PF00078.23|3.6e-06 S_Transcript_219239:1-1209(-)
GDPLSPFRFTLVVDVLSRMLERAMVRGVVEGFAVGRGGTQVSHLQFADDTILFLKADLQSFKHVLTILQVFEVIWVNLGKSNVAGVNMSHGMIDSFASLAGFQTQSWPLLYLGVPLGDNPRAVSFWDPVVDRVTRRLEGWKGVYFSFGGRITLLQSCLSSIPLYFLSLFRISKSVALQLEKLMRDFLWHGSSGDRRDHLVDWNTVCKPKEDGGLGVGRLVLRNIALVGKWLWRFPMETNSLWHMVIRSRYGDPGLGWDVLAPSRSTHAAPWKFVSQVAAFFLPQVELKLGNGSRIRFWEDVWRGDGSFMERFPRMYRLSALHEATVAQFFNGGGWNLHLRRSVRDLELDELSSLFEALEGVLFSDLEDKRIWKADTHGVFSCASFLRSLQGHSGGPTFPIARL

Click here to download the sequence:
Link to NCBI Protein BLAST