Transcript Information: S_Transcript_219260.p1


Annotated TAIR IDAT1G01700.1
Annotated Gene NameRHO guanyl-nucleotide exchange factor 2
Annotated Gene Symbol(s)ATROPGEF2, ROPGEF2
Annotation TypeOrtholog
Chromosome Positionchr1:259495-261474 | Reverse length=485
E-Value6.4E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2517362544154
Replicate 21.218190834464
Replicate 30.90516496115831
Condition 2: 8 Hour
Replicate 11.5263571801629
Replicate 20.91500403434465
Replicate 31.5256741639557
Condition 3: 24 Hour
Replicate 10.84877870413352
Replicate 21.5294596769314
Replicate 31.4957858645161


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219260.p1 GENE.S_Transcript_219260~~S_Transcript_219260.p1 ORF type:complete len:489 (+),score=88.36,PRONE|PF03759.9|1.9e-163 S_Transcript_219260:238-1704(+)
ATGTCTCTGGGGGCCTGCAGGTTAAGGTTGAGGTATTTTTGTTTACAAGGAGTGGTGAAAGAAGTAGACATCATGGAAAGCACAGATGAGAAATATAATGATTTGGGTGGTTATCAAGCCTCACCTTCTTCTGCTGACCCACATGATCAGTCCACGAATTCTCCTATGAGCATTGGTTCTTTTGGGTACTACAGGACTAGTTCCGAGATGTCAACAGCGTCAGAGCCTGCTGACAGCTGCTCCGATGGGGCATCCCCAGTGCGGTGGGTCCCACCCAGGTCTGTCACTGCGCCTCCTGCTTCACCTTCTAGGCTTGGTCTCAGGAGATACATGTACAGCATTGATGATAAGCTTGATGGATTTGAGCCTGTCGATATAGAGCTAGAACTGATGAAAGAAAGATTTTCAAAGCTTCTACTGGGTGAAGATATGTCAGGAAGTGGGAAAGGTGTTTGTTCTGCTGTCACAATCTCCAATGCCATAACTAATCTCTATGCTACCATATTTGGCAATGCTTTGAAGTTGGAACCTCTGAAGCCAGAAAAGAAGATGATGTGGAAAAAAGAAATGGATTGCCTTCTTTCTGTATGTGATTACATTATAGAGTACGTACCTCAAGATGGAAATGACCTCGAGGTGTTGTCAATCAGGCCACGGACAGACATCCAAATGAATCTCCCTGCACTTAGAAAGCTGGACGGAATGCTCATGGACATATTGGATAGCTTCAAGGGCACAGAATTTTGGTATGCAGAACAAGGCAACATGTCTATGACTCCATCTAGAGCAACTTCGTTCAGGAAGGTTGTTACACGGACAGATGAGAAGTGGTGGCTGCCTATTCCCTGCATACCATCTGGTGGTCTCTCTGAGAAGGCAAGGAAACACTTGCGACAACAGCATGATTGTGCCAATCAGATTCACAAAGCTGCCATGGCCATCAACAATAACACACTCAATGAGATGGAAGTCCCAGAATCTTACATTGCAGGTCTTCCAAAGAGCGGAAAATCATGCTTGGGAGACGCAATATACAAATACATGTATAATGCCGAAGTATTCTGCCCTGACCAACTCTTTGACACGTTGAAGATAAACTCGGAACATGAGGCACTTGAACTCACTGACAGAGTAGAGGCTTGCATGTATACCTGGAAGCGTAAGGCTGGGATGACACATTCGAGATCATGGCATATGATGAAAGACCTCAAATCCGAAGGAGATAGGAATGATAAGAATAACAATCTAGCAGAAAGAGCTTCAACTTTACTGTTTTACATCAAGCATAGATTCCCTGAACTATCACAAACAACATTAGACACATGCAAGATCCAATACAACAGGGATGTAGGCCAAGCTATTTTAGAAAGCTACTCAAGAGTACTTGAAGGCCTTGCGTTCAATCTTGTCACTTGGATCAATGATGTACTGTCTGCAGACAAGCTGATGAGAAACAACAAACAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219260.p1 GENE.S_Transcript_219260~~S_Transcript_219260.p1 ORF type:complete len:489 (+),score=88.36,PRONE|PF03759.9|1.9e-163 S_Transcript_219260:238-1704(+)
MSLGACRLRLRYFCLQGVVKEVDIMESTDEKYNDLGGYQASPSSADPHDQSTNSPMSIGSFGYYRTSSEMSTASEPADSCSDGASPVRWVPPRSVTAPPASPSRLGLRRYMYSIDDKLDGFEPVDIELELMKERFSKLLLGEDMSGSGKGVCSAVTISNAITNLYATIFGNALKLEPLKPEKKMMWKKEMDCLLSVCDYIIEYVPQDGNDLEVLSIRPRTDIQMNLPALRKLDGMLMDILDSFKGTEFWYAEQGNMSMTPSRATSFRKVVTRTDEKWWLPIPCIPSGGLSEKARKHLRQQHDCANQIHKAAMAINNNTLNEMEVPESYIAGLPKSGKSCLGDAIYKYMYNAEVFCPDQLFDTLKINSEHEALELTDRVEACMYTWKRKAGMTHSRSWHMMKDLKSEGDRNDKNNNLAERASTLLFYIKHRFPELSQTTLDTCKIQYNRDVGQAILESYSRVLEGLAFNLVTWINDVLSADKLMRNNKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST