Transcript Information: S_Transcript_219395.p1


Annotated TAIR IDAT3G54640.1
Annotated Gene Nametryptophan synthase alpha chain
Annotated Gene Symbol(s)TSA1, TRP3
Annotation TypeOrtholog
Chromosome Positionchr3:20223331-20225303 | Reverse length=312
E-Value1.4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4053568654415
Replicate 27.4821634151572
Replicate 36.8959795790854
Condition 2: 8 Hour
Replicate 16.8612125368167
Replicate 27.5869747560812
Replicate 39.4531150248178
Condition 3: 24 Hour
Replicate 13.7991101722773
Replicate 27.6859882737178
Replicate 36.3603416325945


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219395.p1 GENE.S_Transcript_219395~~S_Transcript_219395.p1 ORF type:5prime_partial len:115 (-),score=28.92,Trp_syntA|PF00290.16|2.5e-27,His_biosynth|PF00977.17|4.5e-07 S_Transcript_219395:154-498(-)
GAAGAAAATTTGTACTTTCATGTTCGACTTTCATTGTTGCTTGTTATGCTGAAGAAGCTATTCACGGTACAGGTGAGTTCTGTTGGAGTTACAGGTGCTCGTGCTGCTGTCAGTACACGAGTTGAAGAACTTCTAAAAGAAATAAAAGAGGCAAGTGATAAACCCGTTGCAGTTGGCTTCGGCATATCAAAGCCTGAGCATGTAAAACAGGTCGCTGGTTGGGGGGCCGATGGTGTGATTGTCGGGAGTGCCATGGTAAAGTTGTTGGGTGAAGCCAAATCAACTGAAGAAGGGTTGAAGGAACTCGAGAAGTTTACCAAGTCTTTGAAATCCGCTCTCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219395.p1 GENE.S_Transcript_219395~~S_Transcript_219395.p1 ORF type:5prime_partial len:115 (-),score=28.92,Trp_syntA|PF00290.16|2.5e-27,His_biosynth|PF00977.17|4.5e-07 S_Transcript_219395:154-498(-)
EENLYFHVRLSLLLVMLKKLFTVQVSSVGVTGARAAVSTRVEELLKEIKEASDKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKLLGEAKSTEEGLKELEKFTKSLKSALP*

Click here to download the sequence:
Link to NCBI Protein BLAST