Transcript Information: S_Transcript_219416.p1


Annotated TAIR IDAT5G67620.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26964891-26965720 | Reverse length=182
E-Value9.7E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1309413217859
Replicate 22.2062789557515
Replicate 31.7357869255153
Condition 2: 8 Hour
Replicate 12.8851998664356
Replicate 22.3687839736181
Replicate 34.1377821821434
Condition 3: 24 Hour
Replicate 10.38549794395166
Replicate 21.5997984642128
Replicate 31.6320146379781


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219416.p1 GENE.S_Transcript_219416~~S_Transcript_219416.p1 ORF type:complete len:170 (+),score=26.56,DUF4228|PF14009.2|9.5e-30 S_Transcript_219416:367-876(+)
ATGGGGAATTGCCAGGCAGCAGAGGCGGCATCCGTGGTGATTCAGCATCCGGGAGTGAAAGGCAAGGTGGAGCGAATATACCGGGCTGTTGCCGCTAGCCAGGTTATGTGTTCGAATCCGGGCCACTACGTTGCTCTTGTTTTCAAGTCCCCGGCCCAGCCCAATGGCCCTCCTGTCAAGCAACTCAAGCTCCTCAGGCCTGATGAAACCTTGCACATTGGCCATGTTTATCGCCTCATTACTTTCGAAGATGTTATAAAGGAATTTACGGCGCAGAAGTCGGCAAAATTGGGCAAATTGATTGGGGCTCATGACAAGAGGAAGAAATTGGATGCTGGTAGTGGTAGTTCCAAACAAGATAATACGGACTCCGCTGAGATGGAGGAATTGGATCACCTGCTAAGCAATACGGTCAGTAACAGCAGCAGTGGCAGAGGAGTTGGTAGGCATCATGGTGGCGGGGGTCAATGGAAGCCAGCCTTACAAAGCATAACCGAAATTGGCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219416.p1 GENE.S_Transcript_219416~~S_Transcript_219416.p1 ORF type:complete len:170 (+),score=26.56,DUF4228|PF14009.2|9.5e-30 S_Transcript_219416:367-876(+)
MGNCQAAEAASVVIQHPGVKGKVERIYRAVAASQVMCSNPGHYVALVFKSPAQPNGPPVKQLKLLRPDETLHIGHVYRLITFEDVIKEFTAQKSAKLGKLIGAHDKRKKLDAGSGSSKQDNTDSAEMEELDHLLSNTVSNSSSGRGVGRHHGGGGQWKPALQSITEIGT*

Click here to download the sequence:
Link to NCBI Protein BLAST