Transcript Information: S_Transcript_219588.p1


Annotated TAIR IDAT5G03240.1
Annotated Gene Namepolyubiquitin 3
Annotated Gene Symbol(s)UBQ3
Annotation TypeOrtholog
Chromosome Positionchr5:771976-772896 | Reverse length=306
E-Value1.7E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4848455624779
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.19203303553413
Replicate 30.36593729793959
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.10824911761852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219588.p1 GENE.S_Transcript_219588~~S_Transcript_219588.p1 ORF type:5prime_partial len:233 (+),score=43.42,ubiquitin|PF00240.19|2.7e-32,ubiquitin|PF00240.19|2.7e-32,ubiquitin|PF00240.19|2.7e-32,Rad60-SLD|PF11976.4|8.2e-16,Rad60-SLD|PF11976.4|8.2e-16,Rad60-SLD|PF11976.4|8.2e-16,Ubiquitin_2|PF14560.2|6e-05,Ubiquitin_2|PF14560.2|0.00012,Ubiquitin_2|PF14560.2|0.00012,Rad60-SLD_2|PF13881.2|0.047,Rad60-SLD_2|PF13881.2|0.049,Rad60-SLD_2|PF13881.2|0.051,Telomere_Sde2|PF13019.2|0.38,Telomere_Sde2|PF13019.2|0.38,Telomere_Sde2|PF13019.2|0.32,DUF2407|PF10302.5|0.29,DUF2407|PF10302.5|0.28,DUF2407|PF10302.5|1.7,DUF2870|PF11069.4|9.7e+03,DUF2870|PF11069.4|3,DUF2870|PF11069.4|1e+04,DUF2870|PF11069.4|3,DUF2870|PF11069.4|1e+04,DUF2870|PF11069.4|3.4 S_Transcript_219588:3-701(+)
AAAGTCACCATGCAAATTTTCGTTAAGACCCTCACTGGTAAGACTATTACCTTGGAAGTCGAATCCAACGACACTATTGAAAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATCCCTCCAGATCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCCTTTCTGATTACAATATCCAAAAGGAATCTACTTTGCACTTGGTCCTCAGATTAAGAGGTGGTATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACAATTACCCTTGAAGTTGAATCAAATGACACTATTGAAAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAACGTTTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAGGAATCAACTCTCCATTTAGTCTTGAGATTAAGAGGTGGTATGCAAATTTTCGTAAAGACTTTGACTGGTAAGACTATCACTTTGGAAGTCGAATCAAATGATACCATTGAAAATGTCAAGTCAAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAAAGACTTATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCCTTTCTGATTACAATATTCAAAAGGAATCAACCCTTCACTTGGTCTTGAGACTCAGAGGTGGTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219588.p1 GENE.S_Transcript_219588~~S_Transcript_219588.p1 ORF type:5prime_partial len:233 (+),score=43.42,ubiquitin|PF00240.19|2.7e-32,ubiquitin|PF00240.19|2.7e-32,ubiquitin|PF00240.19|2.7e-32,Rad60-SLD|PF11976.4|8.2e-16,Rad60-SLD|PF11976.4|8.2e-16,Rad60-SLD|PF11976.4|8.2e-16,Ubiquitin_2|PF14560.2|6e-05,Ubiquitin_2|PF14560.2|0.00012,Ubiquitin_2|PF14560.2|0.00012,Rad60-SLD_2|PF13881.2|0.047,Rad60-SLD_2|PF13881.2|0.049,Rad60-SLD_2|PF13881.2|0.051,Telomere_Sde2|PF13019.2|0.38,Telomere_Sde2|PF13019.2|0.38,Telomere_Sde2|PF13019.2|0.32,DUF2407|PF10302.5|0.29,DUF2407|PF10302.5|0.28,DUF2407|PF10302.5|1.7,DUF2870|PF11069.4|9.7e+03,DUF2870|PF11069.4|3,DUF2870|PF11069.4|1e+04,DUF2870|PF11069.4|3,DUF2870|PF11069.4|1e+04,DUF2870|PF11069.4|3.4 S_Transcript_219588:3-701(+)
KVTMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*

Click here to download the sequence:
Link to NCBI Protein BLAST