Transcript Information: S_Transcript_21994.p1


Annotated TAIR IDAT4G24780.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12770631-12772227 | Reverse length=408
E-Value6.6E-266
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.609104138151
Replicate 220.125569011001
Replicate 316.643444758371
Condition 2: 8 Hour
Replicate 138.541742012184
Replicate 244.470869857017
Replicate 359.528403677326
Condition 3: 24 Hour
Replicate 123.23016878512
Replicate 237.754593430842
Replicate 335.679965256018


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21994.p1 GENE.S_Transcript_21994~~S_Transcript_21994.p1 ORF type:complete len:410 (+),score=76.70,Pec_lyase_C|PF00544.15|1.6e-20 S_Transcript_21994:443-1672(+)
ATGGCATTACATTCATTCTCATTACTCTTTCTCTTAGTTTCTCTCCTAGCTCCTACTTTAGTTCTTTCTTCACGCCCTGCACCTGTCTCTGATCCTGAACTTGTAGTACATGAGGTCCATAGGAGTATCAATGAGTCAGTTGCTAGGAGGAACTTGGGCTACCTCTCATGTGGGACAGGGAACCCCATCGACGATTGCTGGCGTTGTGACCCTGATTGGGAGCAGAACCGCCAGCGGCTAGCTGATTGTGCAATTGGTTTCGGAAAGAACGCCATTGGTGGGAAAAACGGGAGGATTTACGTGGTCACTGACTCAGGAGACGACGACCCTGTGAACCCCAAACCAGGCACTCTTAGGCATGCTGTTATCCAAGATGAACCACTATGGATCATATTCCAAAGAGACATGGTGATAAGATTAAAGGAAGAACTTATCATGAACTCTTTCAAAACAATTGATGGCAGAGGAGCTAGTGTTCACATTGCTGGAGGGCCTTGCATTACCATACAATATGTGACTAATATCATCATACATGGTATAAACGTTCATGATTGCAAGCAAGGAGGGAATGCTATGGTGAGGAGCTCCCCACGACACTACGGGTGGAGAACAATATCAGACGGTGATGGAGTGTCCCTTTTTGGTGCTAGTCATGTTTGGGTGGACCATTGCTCCTTGTCTAACTGTATGGATGGCTTGATTGATGCTATTATGGGGTCCACAGCTGTCACCATCTCAAACAATTTTATGACACACCATGATAAGGTTATGCTCTTGGGCCATAGTGATTCTTACTCTCCTGACAAGAATATGCAAGTTACCATTGCCTTCAACCACTTTGGTGAAGGTCTTGTTCAGAGAATGCCAAGATGCAGACATGGATACTTCCATGTGGTGAACAATGACTACACCCATTGGGAAATGTATGCCATTGGTGGAAGTGCTGACCCTACCATCAATAGCCAAGGCAACAGGTTTCTTGCTCCTGATGACAGATTCAAGAAAGAGGTAACTAAACATGAGGATGCCCCAACAAGTGAATGGAAGAGCTGGAATTGGAGGTCAGAAGGTGACTTAATGCTTAATGGTGCATTTTTCACACCATCTGGGGCAGGAGCTGCATCAAGCTATGCAAGGGCCTCAAGTTTGGGAGCTAGGCCATCCTCCCTTGTTGCTTCACTTACTTCTAATGCTGGTGCACTTGTATGCAGAAAGGGTTCGCGTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21994.p1 GENE.S_Transcript_21994~~S_Transcript_21994.p1 ORF type:complete len:410 (+),score=76.70,Pec_lyase_C|PF00544.15|1.6e-20 S_Transcript_21994:443-1672(+)
MALHSFSLLFLLVSLLAPTLVLSSRPAPVSDPELVVHEVHRSINESVARRNLGYLSCGTGNPIDDCWRCDPDWEQNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFQRDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINVHDCKQGGNAMVRSSPRHYGWRTISDGDGVSLFGASHVWVDHCSLSNCMDGLIDAIMGSTAVTISNNFMTHHDKVMLLGHSDSYSPDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRFLAPDDRFKKEVTKHEDAPTSEWKSWNWRSEGDLMLNGAFFTPSGAGAASSYARASSLGARPSSLVASLTSNAGALVCRKGSRC*

Click here to download the sequence:
Link to NCBI Protein BLAST