Transcript Information: S_Transcript_219943.p1


Annotated TAIR IDAT5G06300.1
Annotated Gene NamePutative lysine decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1922042-1925278 | Reverse length=217
E-Value2.7E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1037650281872
Replicate 21.7284213017408
Replicate 31.5298122096996
Condition 2: 8 Hour
Replicate 12.2602948262399
Replicate 21.5464411502115
Replicate 31.7681348243763
Condition 3: 24 Hour
Replicate 10.80534132684218
Replicate 21.1488568080176
Replicate 31.1623061937841


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219943.p1 GENE.S_Transcript_219943~~S_Transcript_219943.p1 ORF type:complete len:217 (+),score=49.90,Lysine_decarbox|PF03641.10|7.2e-44 S_Transcript_219943:113-763(+)
ATGGAAGAGACAAAACCTTCAAAATTCAATAGGGTGTGTGTGTTCTGTGGAAGCAGTTCTGGCAAGAAATCAAGCTACCAAGAAGCTGCTGTTGAGCTGGGCAAACAACTGGTGGAGAGAAGGATTGATTTGGTGTATGGAGGTGGCAGCGTGGGTCTGATGGGTCTTGTTTCTCAGGCAGCTCATGATGGTGGGCGCCAGGTTCTAGGGGTCATTCCAAAGAGTCTTGTTTCTAAAGAGATAACTGGTGAAACTGTCGGAGAAGTTAAAACTGTATCGAACATGCACCAGCGTAAGGCAGAGATGGCTCGCCAAGCTGACGCATTCATTGCACTACCTGGTGGATATGGTACTCTTGAAGAGCTTTTAGAAGTCATCACTTATGCTCAGCTTGGAATACACCGCAAACCAGTGGGTCTCTTGAATGTGGATGGGTACTACAATTGCTTATTATCGTTCATCGATAAGGCCGTTGATGAAGGCTTTATCTCTACAACTGCTCGTCGTATCATCGTGTCCGCCCCGACAGCCAAAGAATTGTTTATGAAGCTTGAGGAATATGTTCCGGAGATCGATGAATTATCATCCAAGTTGATCTGGGAGGAGATGGAGAGGCCTAATTATGTTCCGGAATCAGGTGTTGCTACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219943.p1 GENE.S_Transcript_219943~~S_Transcript_219943.p1 ORF type:complete len:217 (+),score=49.90,Lysine_decarbox|PF03641.10|7.2e-44 S_Transcript_219943:113-763(+)
MEETKPSKFNRVCVFCGSSSGKKSSYQEAAVELGKQLVERRIDLVYGGGSVGLMGLVSQAAHDGGRQVLGVIPKSLVSKEITGETVGEVKTVSNMHQRKAEMARQADAFIALPGGYGTLEELLEVITYAQLGIHRKPVGLLNVDGYYNCLLSFIDKAVDEGFISTTARRIIVSAPTAKELFMKLEEYVPEIDELSSKLIWEEMERPNYVPESGVAT*

Click here to download the sequence:
Link to NCBI Protein BLAST