Transcript Information: S_Transcript_219993.p1


Annotated TAIR IDAT4G25100.1
Annotated Gene NameFe superoxide dismutase 1
Annotated Gene Symbol(s)FSD1, ATFSD1
Annotation TypeHomolog
Chromosome Positionchr4:12884649-12886501 | Reverse length=212
E-Value2E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44170956406938
Replicate 21.7393900481028
Replicate 30.45915525519338
Condition 2: 8 Hour
Replicate 10.088487096751589
Replicate 20
Replicate 30.26534250130682
Condition 3: 24 Hour
Replicate 10
Replicate 20.94040711935051
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_219993.p1 GENE.S_Transcript_219993~~S_Transcript_219993.p1 ORF type:5prime_partial len:241 (+),score=-3.60,Sod_Fe_C|PF02777.14|2.4e+03,Sod_Fe_C|PF02777.14|5.1e-40,Sod_Fe_N|PF00081.18|6.1e-28,Sod_Fe_N|PF00081.18|9.9e+03 S_Transcript_219993:3-725(+)
AGTCTGTCTACGTGGACAACTTACAAGATGGTCGCTGTGACATCCAGCCGTACATTCGTGGCTCCGGCCCTGCGCGTCGGCCGCGGCCGTGTCGCACGCCGGGGCGGTGCAGTCAAGGCGTTCGACCTCAAGGAGCCCCCTTATGCCCTCAACGCACTGGAGCCTCATATGAGCGAGGACACACTGAACTACCACTGGGGCAAGCATCATCGCACTTATGTCAACAGCATGAACAAGATGATCGAGGGCACAGATGACGAGAACAAAGACCTTGAGACGCTCATCAAGGAGAGCTGGAACAATGGCGATCCCAAGCCGCTCTTCAACCAGGCGGCGCAGACGTGGAATCACACCTTCTTCTGGGAGGGCATGGGCCCCGACGGCGGTGGTGAGCCGACCGGCAAGGTCGCCGACGCGATCAACTCTGCGTTTGGCAGCTTTGACGAGTTCAAGAGCCAGTTTGCGACCGCGGGCGCGACGCAGTTTGGCTCCGGCTGGGCGTGGCTGAACGCCAACAAGGATGGCTCCGTCGAGATCCAGAAGACCCCCAACGCGGTCAACCCGATTGCAGAGGGCAAGACGCCCATCCTCACGATGGACGTGTGGGAGCACGCGTACTACCTTGACTTCCAGAATGCGCGCGCAAGCTACATTGACACCTTCCTCAACAAGCTCATCAACTGGGACGAGGTGAACAAGCGCTACGAGGCCGCCACGTCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_219993.p1 GENE.S_Transcript_219993~~S_Transcript_219993.p1 ORF type:5prime_partial len:241 (+),score=-3.60,Sod_Fe_C|PF02777.14|2.4e+03,Sod_Fe_C|PF02777.14|5.1e-40,Sod_Fe_N|PF00081.18|6.1e-28,Sod_Fe_N|PF00081.18|9.9e+03 S_Transcript_219993:3-725(+)
SLSTWTTYKMVAVTSSRTFVAPALRVGRGRVARRGGAVKAFDLKEPPYALNALEPHMSEDTLNYHWGKHHRTYVNSMNKMIEGTDDENKDLETLIKESWNNGDPKPLFNQAAQTWNHTFFWEGMGPDGGGEPTGKVADAINSAFGSFDEFKSQFATAGATQFGSGWAWLNANKDGSVEIQKTPNAVNPIAEGKTPILTMDVWEHAYYLDFQNARASYIDTFLNKLINWDEVNKRYEAATS*

Click here to download the sequence:
Link to NCBI Protein BLAST