Transcript Information: S_Transcript_220186.p1


Annotated TAIR IDAT2G47450.1
Annotated Gene Namechloroplast signal recognition particle component (CAO)
Annotated Gene Symbol(s)CAO, CPSRP43
Annotation TypeOrtholog
Chromosome Positionchr2:19472781-19473902 | Forward length=373
E-Value2.7E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1133.63124024474
Replicate 2135.54532946239
Replicate 3155.48796113036
Condition 2: 8 Hour
Replicate 188.137384449002
Replicate 291.510380872073
Replicate 389.231766303832
Condition 3: 24 Hour
Replicate 1141.70125221691
Replicate 2119.64804781662
Replicate 3127.45182013224


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220186.p1 GENE.S_Transcript_220186~~S_Transcript_220186.p1 ORF type:complete len:376 (+),score=49.38,Chromo|PF00385.20|0.42,Chromo|PF00385.20|0.041,Chromo|PF00385.20|2.7e-06,Ank_5|PF13857.2|3,Ank_5|PF13857.2|3,Ank_5|PF13857.2|1.5e-08,Ank_4|PF13637.2|1.5,Ank_4|PF13637.2|0.00025,Ank_2|PF12796.3|4.5e-07,Ank_3|PF13606.2|7.6e+03,Ank_3|PF13606.2|1.2e+02,Ank_3|PF13606.2|0.00022,Ank_3|PF13606.2|1.1e+04,Mtf2_C|PF14061.2|1.1,Mtf2_C|PF14061.2|94,Mtf2_C|PF14061.2|0.04,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|14,Ank|PF00023.26|0.027,Ank|PF00023.26|8.4e+02 S_Transcript_220186:227-1354(+)
ATGGACTCCCTCTCTATCACTCCCCACCTCTCTCGACTCAAACTCACCTCCAACCTCCCTTTCTCTTCTCCTCACTTCCTTTCACCTCAACATCTCAACCACCACTATCACCTCCGCCGCCTCAATCTCCGCCTTCTAGCCACCCAAAACCAAGACCAAACACCACCATTCACAAATTTCCAAGACTACAATGAAGATGAGTCTTATGGTGAAGTCAACAAAATCATTGGTAGTAGATCATCCTACACCCCTACCGGCAACCCCAAGATGGAGTACTTAATTGAGTGGAAAGATGACCATGCACCCACATGGGTCCCATCCCAGCTCATCGCCGCCGACGTCGTCTCCGAGTACGAGTCCCCCTGGTGGACCGCCGCGAAGAAAGCCGACGCTGAGGAGCTCCGGCGGATCATCGACTCCGACGAGGGCAGTGGCCGCGACGTCAACGCCGTGGACCCTGACGGCCGGACTGCCCTCCACTTCGTGTCGGGCCTCGGCTCCGGCGAGGCTGTCGGAGTCCTCGCTGGAGCCGGCGCCGTTGTTGACCGGCAGGATTTTTCCAGCGGGCTGACGCCACTCCATATGGCGGCCGGGTACGCTCGGCCCGAAGCTACCCGGGCTTTGATCGAATTCGGGGCTGACCCGGAAGTTGAGGATGAGAAGGGGCGTACACCGTTGGAGCTTGCGCGGGAAATATTGGCAGTTACGCCTAAAGGAAACCCTTTGCAATTTGGGAGGAGATTAGCGCTTGAGAATGTGATTAAGGTTTTAGAAGGGGCGGTTTTTGAATATGCGGAAGTTGAAGGGGTTTTGGAGAAAAGAGGGAAAGGAGAGAATTTGGAGTATTTGGTTAAGTGGAGGGATGGTGGGGAGAATGAGTGGGTTAAGGCTGGGCTTATAGCTGAGGATTTGGTTAGGGATTTCGAAGCCGGGCTCGAATATGCCGAGGCCCAAGGCGTGGTGGGTAAACGGGTCGGAGATGACGGGAAAACGGAGTTTTTAGTAAAGTGGGTCGATATCGAAGAGCCTACTTGGGAACCCGAGGAGAATGTGGATCCAGATTTGGTAAAGGAGTTTGAGGAGACGCAAGTTGGTAAAGAGGTTCAATTGAGTAGTAACATTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220186.p1 GENE.S_Transcript_220186~~S_Transcript_220186.p1 ORF type:complete len:376 (+),score=49.38,Chromo|PF00385.20|0.42,Chromo|PF00385.20|0.041,Chromo|PF00385.20|2.7e-06,Ank_5|PF13857.2|3,Ank_5|PF13857.2|3,Ank_5|PF13857.2|1.5e-08,Ank_4|PF13637.2|1.5,Ank_4|PF13637.2|0.00025,Ank_2|PF12796.3|4.5e-07,Ank_3|PF13606.2|7.6e+03,Ank_3|PF13606.2|1.2e+02,Ank_3|PF13606.2|0.00022,Ank_3|PF13606.2|1.1e+04,Mtf2_C|PF14061.2|1.1,Mtf2_C|PF14061.2|94,Mtf2_C|PF14061.2|0.04,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|14,Ank|PF00023.26|0.027,Ank|PF00023.26|8.4e+02 S_Transcript_220186:227-1354(+)
MDSLSITPHLSRLKLTSNLPFSSPHFLSPQHLNHHYHLRRLNLRLLATQNQDQTPPFTNFQDYNEDESYGEVNKIIGSRSSYTPTGNPKMEYLIEWKDDHAPTWVPSQLIAADVVSEYESPWWTAAKKADAEELRRIIDSDEGSGRDVNAVDPDGRTALHFVSGLGSGEAVGVLAGAGAVVDRQDFSSGLTPLHMAAGYARPEATRALIEFGADPEVEDEKGRTPLELAREILAVTPKGNPLQFGRRLALENVIKVLEGAVFEYAEVEGVLEKRGKGENLEYLVKWRDGGENEWVKAGLIAEDLVRDFEAGLEYAEAQGVVGKRVGDDGKTEFLVKWVDIEEPTWEPEENVDPDLVKEFEETQVGKEVQLSSNIS*

Click here to download the sequence:
Link to NCBI Protein BLAST