Transcript Information: S_Transcript_220392.p1


Annotated TAIR IDAT4G16390.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)SVR7
Annotation TypeOrtholog
Chromosome Positionchr4:9257985-9260093 | Forward length=702
E-Value5.3e-322
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.702802538959
Replicate 225.745211987258
Replicate 327.41200917174
Condition 2: 8 Hour
Replicate 129.333918191625
Replicate 230.290517366882
Replicate 330.731624892362
Condition 3: 24 Hour
Replicate 119.078912631354
Replicate 220.185466713322
Replicate 321.302647576695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220392.p1 GENE.S_Transcript_220392~~S_Transcript_220392.p1 ORF type:complete len:695 (+),score=118.87,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|3.8e-07,PPR_2|PF13041.2|1.4e-11,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|7e-13,PPR_2|PF13041.2|0.0054,PPR_2|PF13041.2|0.00076,PPR_2|PF13041.2|96,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.014,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|9.5e-06,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.0079,PPR|PF01535.16|8.4,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|0.0009,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.4e+02,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|7.7e-05,PPR_1|PF12854.3|0.79,PPR_1|PF12854.3|6.3e-05,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|2.7e+02,TPR_14|PF13428.2|3.1,TPR_14|PF13428.2|16,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|1.5e+03,TPR_7|PF13176.2|3.8e+02,TPR_7|PF13176.2|43,TPR_7|PF13176.2|4.4e+02,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|5.5,TPR_7|PF13176.2|5e+03,TPR_7|PF13176.2|6.1e+02,TPR_7|PF13176.2|2.4e+03 S_Transcript_220392:309-2393(+)
ATGGCACACCATCTCTGTTGTTGGCCATTCTCAGCCTGCGACTACCAATCCAAACTCCTCCACCTCACTCCACCTTTCTCTCTTCCCCCCACCACCTTCCGCCTTCCCAACCCCAACTTACGCTTCCTTGTCAAGTGCTCCCAACTCTCACTGTCTGACTCAATTGACACTTCTACTCATAAACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTAATAAAAGCAGCTACGTCTGGGTGAATCCCAAGAGCCCCAGAGCTTCACAGCTCCGTAAACAGTCCTACGACTCCAGGTACTCCTCTCTCGTCCGCATTTCTCGTTCTTTAGATTCTTGTCTTCCTAATCCCGAGGCCGTGTCTAGTCTCTTGTCTTCCACTTTCGCCCATACTACTAATCTTGTTGAGCAGGACGCTGTTATTGTTCTCAACAACATGACCAACCCTGACACTGCTTTATTAGCCCTTCAATTCTTTCTGGATAAACTTAGACTAGTTACCAAAGAGGTTGTTTTGTACAACGTTACTTTCAAGGTTTTGAGAAAACGTAGGGATTTGGATAGAGCAGAGAAGCTGTTCGACGAAATGATCCAGAGAGGAGTTAAACCTGATAATGTTACTTTCTCTACTATTATTAGCTGCTCTAGGATGTCCAATTTGCCCCTTAAAGCTGTTGAGTGGTTTGAGAAGATGCCTGCCTTTGGCTGCACTCCTGATGATGTTACTTATTCTGCTATGATTGATGCTTATGGTAAGGCTGGTGACGTCCATAGGGCGTTGGGTTTGTATGACCGTGCTAGGACCGAGCGCTGGTGGATTGATGCCGTTACTTTTTCTACCTTGATTAAGATTTATGGTAAGACTGGTAATTATGATGGTTGCTTGAATGTCTATGAGGAGATGAAGGCTTTGGGTGTTAAGCCTAACTTGGTTGTTTATAATACTTTGTTGGATGCTATGGGCCGGGCTAAACGGCCTTGGCAAGCTAAGAATATTTACAAGGAGATGACTGCCAATGGCTTTGCTCCTAGTTGGGGAACTTATGTTGCTCTTTTAAGGGCTTTCTGTCGGGCTCGTTATGGTGAGGATGCTCTCAAGGTTTATATGGAGATGAAGGAGAAGGGTTTCCAGTTAAATGTTATCCTTTACAACACACTTTTAGCTATGTGCGCTGATGTCGGGTATACTGATGAAGCTCTACGGCTGTATGAAGAGATGAAGAGCTCCGGGACTTGTGCCCCAGATAGCTGGACTTTTTCGTCCATGATTACTATATATTCATGCAGCGGATTAGTCAGTGAAGCTGAGAGCGTGCTGACTGAGATGGTAGAAGCTGGTTTTGAGCCTAACATCTTTATTATGACCTCCCTTATCCAGTGCTACGGGAAGGCTAATCGTACTGATGATGTTGTCAAGACGTTCAATAGGGTTTTGGAATTGGGTCTAACTCCTGATGATAGGTTTTGTGGGTGTCTCTTAAATGTCATGACACAAGCTTCAAATGGGGAAGTGAGTAAGCTCATAGGATGTGTTGAGAAAGCTAATCAAAAGCTTGGTTATGTGGTTAGAATGTTGATGGAGGGGACGGAAAACAGTGAAGCGCAGTTTAAGGAAGCAGCCTCTGAACTATTTGATACAATCAGTGTTGAAGTTAGGAAAGCTTATTGTAATTGCTTAGTTGATCTATGTGTCAACCTTAACATGTTGGACAAAGCTTGTCAGCTCTTGGATCTCGGTCTCTCTTCTCAGATCTACATTGATATACAAACCAGAACTCCCACTCAGTGGTCTTTGCACTTGAAATCACTTTCCCTTGGAGCAGCATTGACTGCTTTACATGTCTGGATGAATGACTTAACGAAGGCTATAGAGAATGGAGAGGAACTGCCTCCATTGCTTGGAATCAATACAGGACATGGGAAACACAAATACTCTGCGAAAGGATTGGCGGGTGTTTTTGAGGCTCATCTGAAGGAACTTAATGCACCCTTCCATGAGGCTCCGGATAAGGCTGGCTGGTTTCTGACAACAAAAGCTGCTGCAACGTCATGGTTGGGGTCTCGAAAGTCCCCAGAGCTAGCTTCTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220392.p1 GENE.S_Transcript_220392~~S_Transcript_220392.p1 ORF type:complete len:695 (+),score=118.87,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|3.8e-07,PPR_2|PF13041.2|1.4e-11,PPR_2|PF13041.2|5.4e-07,PPR_2|PF13041.2|7e-13,PPR_2|PF13041.2|0.0054,PPR_2|PF13041.2|0.00076,PPR_2|PF13041.2|96,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.014,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.00016,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|9.5e-06,PPR|PF01535.16|8.8e-06,PPR|PF01535.16|0.0079,PPR|PF01535.16|8.4,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|21,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|1.4e-05,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|0.0009,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.4e+02,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|7.7e-05,PPR_1|PF12854.3|0.79,PPR_1|PF12854.3|6.3e-05,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|2.7e+02,TPR_14|PF13428.2|3.1,TPR_14|PF13428.2|16,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|1.5e+03,TPR_7|PF13176.2|3.8e+02,TPR_7|PF13176.2|43,TPR_7|PF13176.2|4.4e+02,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|5.5,TPR_7|PF13176.2|5e+03,TPR_7|PF13176.2|6.1e+02,TPR_7|PF13176.2|2.4e+03 S_Transcript_220392:309-2393(+)
MAHHLCCWPFSACDYQSKLLHLTPPFSLPPTTFRLPNPNLRFLVKCSQLSLSDSIDTSTHKPSSSSSSSSSNKSSYVWVNPKSPRASQLRKQSYDSRYSSLVRISRSLDSCLPNPEAVSSLLSSTFAHTTNLVEQDAVIVLNNMTNPDTALLALQFFLDKLRLVTKEVVLYNVTFKVLRKRRDLDRAEKLFDEMIQRGVKPDNVTFSTIISCSRMSNLPLKAVEWFEKMPAFGCTPDDVTYSAMIDAYGKAGDVHRALGLYDRARTERWWIDAVTFSTLIKIYGKTGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKNIYKEMTANGFAPSWGTYVALLRAFCRARYGEDALKVYMEMKEKGFQLNVILYNTLLAMCADVGYTDEALRLYEEMKSSGTCAPDSWTFSSMITIYSCSGLVSEAESVLTEMVEAGFEPNIFIMTSLIQCYGKANRTDDVVKTFNRVLELGLTPDDRFCGCLLNVMTQASNGEVSKLIGCVEKANQKLGYVVRMLMEGTENSEAQFKEAASELFDTISVEVRKAYCNCLVDLCVNLNMLDKACQLLDLGLSSQIYIDIQTRTPTQWSLHLKSLSLGAALTALHVWMNDLTKAIENGEELPPLLGINTGHGKHKYSAKGLAGVFEAHLKELNAPFHEAPDKAGWFLTTKAAATSWLGSRKSPELASD*

Click here to download the sequence:
Link to NCBI Protein BLAST