Transcript Information: S_Transcript_220567.p1


Annotated TAIR IDAT1G76160.1
Annotated Gene NameSKU5 similar 5
Annotated Gene Symbol(s)sks5
Annotation TypeOrtholog
Chromosome Positionchr1:28578211-28581020 | Reverse length=541
E-Value8.7E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1814182791318
Replicate 20.36084001612758
Replicate 30.25854302920935
Condition 2: 8 Hour
Replicate 10.39860542648847
Replicate 20.47043606952696
Replicate 30.54783720480092
Condition 3: 24 Hour
Replicate 10.05103944740793
Replicate 20.37066981550101
Replicate 30.11786002058466


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220567.p1 GENE.S_Transcript_220567~~S_Transcript_220567.p1 ORF type:complete len:428 (+),score=46.25,Cu-oxidase|PF00394.18|2.1e-37,Cu-oxidase|PF00394.18|4.3e+02,Cu-oxidase_2|PF07731.10|34,Cu-oxidase_2|PF07731.10|2.9e-25 S_Transcript_220567:202-1485(+)
ATGCAAGTGAAAGATCAAATTGGGAGCTTCTTCTATTTCCCCTCAACAGCTTTCCACAAGGCAGCTGGTGCCTTTGGTGGGATTCGGATTTCCAGCAGACCACTCATTCCTGTTCCCTTTCCCCAGCCAGCAAATGACTTTACCCTTCTCACTGGGGATTGGTACCTTAAAGATCATGCGGACTTGAGGGCCATTTTGGAACGTGGAAAGAAGCTACCGTTTCCTGATGGGAATCATATCAATGGGAGACGACCAAATGATGTAGCTTTTACTGTTGAAATGGGGAAGACATACAGATTCAGAATATCAAACGTGGGGCTTCAGAATTCACTTAACATAAGATTTGAAGGTCATAAAATGAAATTAGTGGAAGTAGAAGGGACCCACACAATGCAAGACTCTTATTCATCATTGGATGTCCACGTGGGCCAGTCATATTCTGTTTTAGTCACGGCTGATCAAGAGGTAAGAGACTACTACATTGCGGTTTCGACCCGATTCACTAATCGGATCCTTACTACCACCGCTATCCTACATTATGAGGGCTCCACAAGCCCAGTATCCGGCCCTCCCCCTGGTGGGCCCACCATAGAGGTTGGTTGGTCTCTTGAGCAAGCACGAAGCATAAGGACCAATTTAACGGCAAGTGGGCCAAGACCAAATCCACAAGGGTCATACCATTATGGAGAAATTCCAGTGAAGAGGACAATAAGGCTAAGGAGTTATGCAGGTCGAGTGGATGAAAAACAAAGATATGGTGTCAACAGTGTTTCTTTCATTCCAGCAGATACACCACTAAAGCTAGCCGATAACTTCAACATTCCCGGTGTATTCCGGGTTGGAAGCATCCCTGATCACCCAATTGGCAAGCGAATGTACCTTGACGCCGGGGTTCTGGGGGCAGATTACCGCGACTTTGTGGAGATTGTCTTTGAGAACAAGAAGAACATCGTCCAATCTTGGCACCTTGACGGCTACAACTTCTTCGTCGTAGGAATGGATGGCGGAAAATGGACACCTAAGAGCAGGTCACAGTACAATCTTCATGATGCAGTTTCGCGTTGCACAACACAAGTGTATCCAAGATCCTGGACCGCGGTGTATGTAGCATTAGACAACGTTGATATGTGGAATGTGAGGACTCAGTTCTGGGCAAGGCAGTATCTTGGAGAACAATTTTACTTGAGAGTTTATACACCATCACATTCTGTCAGAGATGAATACCCATACCTGATAACGTCATTCTATGCGGCAGGGCTCTCGGCCATGTTTAGACTTGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220567.p1 GENE.S_Transcript_220567~~S_Transcript_220567.p1 ORF type:complete len:428 (+),score=46.25,Cu-oxidase|PF00394.18|2.1e-37,Cu-oxidase|PF00394.18|4.3e+02,Cu-oxidase_2|PF07731.10|34,Cu-oxidase_2|PF07731.10|2.9e-25 S_Transcript_220567:202-1485(+)
MQVKDQIGSFFYFPSTAFHKAAGAFGGIRISSRPLIPVPFPQPANDFTLLTGDWYLKDHADLRAILERGKKLPFPDGNHINGRRPNDVAFTVEMGKTYRFRISNVGLQNSLNIRFEGHKMKLVEVEGTHTMQDSYSSLDVHVGQSYSVLVTADQEVRDYYIAVSTRFTNRILTTTAILHYEGSTSPVSGPPPGGPTIEVGWSLEQARSIRTNLTASGPRPNPQGSYHYGEIPVKRTIRLRSYAGRVDEKQRYGVNSVSFIPADTPLKLADNFNIPGVFRVGSIPDHPIGKRMYLDAGVLGADYRDFVEIVFENKKNIVQSWHLDGYNFFVVGMDGGKWTPKSRSQYNLHDAVSRCTTQVYPRSWTAVYVALDNVDMWNVRTQFWARQYLGEQFYLRVYTPSHSVRDEYPYLITSFYAAGLSAMFRLA*

Click here to download the sequence:
Link to NCBI Protein BLAST