Transcript Information: S_Transcript_220729.p1


Annotated TAIR IDAT5G42990.1
Annotated Gene Nameubiquitin-conjugating enzyme 18
Annotated Gene Symbol(s)UBC18
Annotation TypeOrtholog
Chromosome Positionchr5:17244206-17245904 | Reverse length=161
E-Value2.3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4903280691701
Replicate 20
Replicate 30.1475418886688
Condition 2: 8 Hour
Replicate 10.34120624507413
Replicate 20.53692436735344
Replicate 30.3410535616797
Condition 3: 24 Hour
Replicate 10
Replicate 20.72524197044312
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220729.p1 GENE.S_Transcript_220729~~S_Transcript_220729.p1 ORF type:5prime_partial len:125 (+),score=19.59,UQ_con|PF00179.22|2.2e-24 S_Transcript_220729:2-376(+)
CAAAATCGGCTTCAAAAAGAGCTAGTTGAGTGGCAAGTCAATCCCCCTACTGGGTTCAAACATAAAGTCACTGATAATCTTCAAAGGTGGGTGATTGAGGTAACTGGAGCACCCGGGACACTGTATGCTAATGAAACTTATCAGCTTCATGTTGATTTTCCTGAGCACTATCCTATGGAAGCTCCTCAGGTTATATTTGTACCTCCAGCGCCTCCACACCCTCACATTTACAGCAATGGGCATATTTGTTTAGGTGGTTACTTAGTGCTCCAGTGTTCAGTTGTCACTGATTTCTCAGAAAAACCATGGTTGCTGATGCTGTGCCAGCTTAGTACTAGCAAGATATTTTATATGATTCTTGGTCCCCGGCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220729.p1 GENE.S_Transcript_220729~~S_Transcript_220729.p1 ORF type:5prime_partial len:125 (+),score=19.59,UQ_con|PF00179.22|2.2e-24 S_Transcript_220729:2-376(+)
QNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVTGAPGTLYANETYQLHVDFPEHYPMEAPQVIFVPPAPPHPHIYSNGHICLGGYLVLQCSVVTDFSEKPWLLMLCQLSTSKIFYMILGPRL*

Click here to download the sequence:
Link to NCBI Protein BLAST