Transcript Information: S_Transcript_22077.p1


Annotated TAIR IDAT5G61330.1
Annotated Gene NamerRNA processing protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24657287-24660103 | Reverse length=436
E-Value5.7E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.699756124351
Replicate 213.438725533834
Replicate 314.506516631705
Condition 2: 8 Hour
Replicate 114.677187100761
Replicate 215.129163828304
Replicate 314.261682210527
Condition 3: 24 Hour
Replicate 110.791477215977
Replicate 212.935220995613
Replicate 311.975934753508


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_22077.p1 GENE.S_Transcript_22077~~S_Transcript_22077.p1 ORF type:complete len:417 (+),score=121.65,AATF-Che1|PF13339.2|47,AATF-Che1|PF13339.2|1.7e-28,AATF-Che1|PF13339.2|3.7e+02,TRAUB|PF08164.8|3.6e+03,TRAUB|PF08164.8|4.6e-22 S_Transcript_22077:133-1383(+)
ATGGGGTCTTTCCGAAAGGCACTGAAACGAGCTCACCCGAGCTACGGTGAATCCGGTTCTAAAGAAGAAGAAGAAGATGAATTTGAGGATGAGGTCGCTGGAGAAGAAGAATTCAGCGGCTCTGATGATTATTCCGGTGAGGAGGATGACGACGATCAGAGTAACAGAGACGAAGACGAACACGAAGAAGAAGATGAAGACCAAGATGAAGATGAAGAATCTGATGATGATGATGGAGCTAAGGTGAATAACGTTGGAAAATTTGACGAAATGGAGGAACTGGAGAAAGAGTACAAGGAACTTCGAAACCAGGAGCAAAGTTTAGTACAAAATTTGAAGCGACACAAGGATGAAGATCTTGTTAAGGGACAGGCAATCAAGAACCAAAAGGCTTTGTGGGATAAGGCCCTTGAGCTCAGAATCTGTTTGCAGAAAGCATTCTGCATAACAAACAAGCTACCGCAGGAGCCGGTTCGATCATTATTCTGTGAGTCAGATGATGGGGTATCGGCTGTATATTCAGATCTCATTGATTCATCTAAGAAGGCAATAGATTCCCTAGTCCAATTACAAGAGGCTTTAACTGACAATAATCCATCAGTTGCTGAAGCCAGAGAAGAAGGGGAATCTCAATCGTCTGTTAAATCCTCTGGTGAGTTTGACAAGGAGGAAGAGTGGGCACATATATCTCAAATGCAATCAAGATTAGCACCTTTTAGAAACACGGCAATAGATAAGTGGCAGAGGAAAGCTGATGTTCATAGTGGTGCTGCAGCAAAAAAGGCGAAATTATTAGCTTTTAACCAGAATATAAGTGATCAAGTTCCGACATACATGAGGGATCCAAGTAAAATGATCCGGAGTATGCAAATGAAAAGAGAGGAAATTGGTGTCTTTGGCTTTGTTCCTCCGCAAGTTGGGGATGGCAAGGAGGAGGGAAATGTTGAGGGTGACCCAGAGCTTCTGGATGACTCTGAGTTTTACCAGCAGCTGCTGAAAGAATTCTTGGAGGCATCTGACTTAACATCTCACTTAATGTCTTCTGAGTCGGCATATGATGCTAACAAGAAGAAAAGAAAAAGAAAGGATGTTGATCGACGAGCCTCCAAGAGCCGCAAGATCAGGTATAATGTCCATGAAAAGATTGTCAATTTCATGGCTCCACAACCAATGGACCTTCCCCCAATGGCGCCCAAGTTATTCGAGAATTTGTTTGCGTTGAAAACTCAGAAAGCTACATCAGCTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_22077.p1 GENE.S_Transcript_22077~~S_Transcript_22077.p1 ORF type:complete len:417 (+),score=121.65,AATF-Che1|PF13339.2|47,AATF-Che1|PF13339.2|1.7e-28,AATF-Che1|PF13339.2|3.7e+02,TRAUB|PF08164.8|3.6e+03,TRAUB|PF08164.8|4.6e-22 S_Transcript_22077:133-1383(+)
MGSFRKALKRAHPSYGESGSKEEEEDEFEDEVAGEEEFSGSDDYSGEEDDDDQSNRDEDEHEEEDEDQDEDEESDDDDGAKVNNVGKFDEMEELEKEYKELRNQEQSLVQNLKRHKDEDLVKGQAIKNQKALWDKALELRICLQKAFCITNKLPQEPVRSLFCESDDGVSAVYSDLIDSSKKAIDSLVQLQEALTDNNPSVAEAREEGESQSSVKSSGEFDKEEEWAHISQMQSRLAPFRNTAIDKWQRKADVHSGAAAKKAKLLAFNQNISDQVPTYMRDPSKMIRSMQMKREEIGVFGFVPPQVGDGKEEGNVEGDPELLDDSEFYQQLLKEFLEASDLTSHLMSSESAYDANKKKRKRKDVDRRASKSRKIRYNVHEKIVNFMAPQPMDLPPMAPKLFENLFALKTQKATSAA*

Click here to download the sequence:
Link to NCBI Protein BLAST