Transcript Information: S_Transcript_220795.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3936041843519
Replicate 23.8498827415798
Replicate 32.8468653014954
Condition 2: 8 Hour
Replicate 12.146851374208
Replicate 23.002932703319
Replicate 33.2903657376817
Condition 3: 24 Hour
Replicate 12.3457593010034
Replicate 22.433697887393
Replicate 33.0469583845107


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220795.p1 GENE.S_Transcript_220795~~S_Transcript_220795.p1 ORF type:internal len:149 (-),score=9.63,Myb_DNA-bind_3|PF12776.3|1.1e+04,Myb_DNA-bind_3|PF12776.3|1.1e-12 S_Transcript_220795:3-446(-)
CTATATCTAACATTAAGAAAGTATTATGTTTTTTTATTCTTGGATGATAGTGCATATAAATTGTATTACAATTTTCTTATTCTTTTTAAATTTTCTTCTATACTTAGATGGCAACAAATCGAAAAAAAGAATAAAGATGATATTGAAGGTGGTGGTGAAATAGGGAGACATGATTATGGAAGAGTTAAGTGGTCAAAAGAATTACTCCACATTCTTTATGATCTTTGTATTCAATATACTGAAAAAAATAAAGGAAAACGTGGCGAGGTTATTTCTCAAAGAATAGAATGGAAAAAAGTTGTGCCAGAATTTGAGAAAAAGACTAAATTATCATGGGACAAACCAAGATTTAAAAACAAATTAGACAACTATAAGTCATCTTGGAGTCTTTGGAAGCAATTGCAAGGGAAGGAGACGGGATTAGGGTGGGATGCCGAAAAAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220795.p1 GENE.S_Transcript_220795~~S_Transcript_220795.p1 ORF type:internal len:149 (-),score=9.63,Myb_DNA-bind_3|PF12776.3|1.1e+04,Myb_DNA-bind_3|PF12776.3|1.1e-12 S_Transcript_220795:3-446(-)
LYLTLRKYYVFLFLDDSAYKLYYNFLILFKFSSILRWQQIEKKNKDDIEGGGEIGRHDYGRVKWSKELLHILYDLCIQYTEKNKGKRGEVISQRIEWKKVVPEFEKKTKLSWDKPRFKNKLDNYKSSWSLWKQLQGKETGLGWDAEKG

Click here to download the sequence:
Link to NCBI Protein BLAST