Transcript Information: S_Transcript_220798.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3142222832188
Replicate 20
Replicate 30.91075239919015
Condition 2: 8 Hour
Replicate 10.26327642366831
Replicate 20.55239132443769
Replicate 30
Condition 3: 24 Hour
Replicate 11.0787596785479
Replicate 20.83940042875361
Replicate 30.31138326426069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220798.p1 GENE.S_Transcript_220798~~S_Transcript_220798.p1 ORF type:internal len:81 (+),score=3.02,DDE_Tnp_4|PF13359.2|1.8e-09 S_Transcript_220798:2-241(+)
TTTGATTTGCTATTCACATATGTTTTAACGGGATGGGAAGGATCAGCACATGATACACGCATTTTCCTAGAAACAATCAACAATCCAAGTCTCAAATTTCCAAAACCACCGACAGGCAAATATTATTTGGTCGACAAAGGCTACCCAGAAAGACAAGTATATTTAACACCTTATCCCAAAATAAGATATCATCAATCTGAGTTTTGTGGTGCAAATCCAAGGGGGTCTCGAGAAATCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220798.p1 GENE.S_Transcript_220798~~S_Transcript_220798.p1 ORF type:internal len:81 (+),score=3.02,DDE_Tnp_4|PF13359.2|1.8e-09 S_Transcript_220798:2-241(+)
FDLLFTYVLTGWEGSAHDTRIFLETINNPSLKFPKPPTGKYYLVDKGYPERQVYLTPYPKIRYHQSEFCGANPRGSREIF

Click here to download the sequence:
Link to NCBI Protein BLAST