Transcript Information: S_Transcript_220803.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.07148347319225
Condition 2: 8 Hour
Replicate 10.082656551616795
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.087844230916075
Replicate 30.097759862035334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220803.p1 GENE.S_Transcript_220803~~S_Transcript_220803.p1 ORF type:5prime_partial len:258 (-),score=11.56,DDE_Tnp_4|PF13359.2|4.7e-09 S_Transcript_220803:291-1064(-)
TGGATGAATGAAATTTTGAATGGTCATGAAAAAAGGTGCTTTAACATGTTTAGAATAAATCAAGATACAATACATCATTTATGTACAGATTTGGAAGGCAAATATGGTTTAAAACCTTCAAATAAAATTTCCATATTGGAGAAAGTGGGTCTGTTTGTTTATGTTCTTAGTAAAGGAGCTTCCAATAGATATTCTCAAGAGCGTTTTCAACACTCTGGTGAAACGGTGAGTAGAGTTTTTAAAGAAGTTCTAACTGCTATGGATGGCCTCTCAAGAGATATACTTGTGCCAAGAGATCCCGAATTCAAGGAGATTCCACCACAAATTGCAAATGATACTAGATATATGGCACATTTTAAGGATTGCATTGGAGCTATTGATGATACTCATATATCATTGATTGTCCCGGAGGAGGATCAAATTCGATATAAAGGAAAAAAAATGATACCAACTACCAACGTTTTAGCAGCATGTGACTTTGATTTGCTATTCACATATGTTTTAACGGGATGGGAAGGATCGGCACATGATACACGCATTTTCCTAGACACAATCAACAATCCAAGTCTCAAATTTCCAAAACCACCGACAGGTAATTACTTTAGTATCATTTATTATACATTTGATTTAAATTTTTTTTTGAAAGGATATTTGAAACCTCATCTAAAATCAATTCTACGCAATTGTAGGCAAATATTATTTGGTAGACAAAGGCTACCCAAAAAGACAAGGATATTTAACACCTTATCCCAAAATAAGATATCATCAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220803.p1 GENE.S_Transcript_220803~~S_Transcript_220803.p1 ORF type:5prime_partial len:258 (-),score=11.56,DDE_Tnp_4|PF13359.2|4.7e-09 S_Transcript_220803:291-1064(-)
WMNEILNGHEKRCFNMFRINQDTIHHLCTDLEGKYGLKPSNKISILEKVGLFVYVLSKGASNRYSQERFQHSGETVSRVFKEVLTAMDGLSRDILVPRDPEFKEIPPQIANDTRYMAHFKDCIGAIDDTHISLIVPEEDQIRYKGKKMIPTTNVLAACDFDLLFTYVLTGWEGSAHDTRIFLDTINNPSLKFPKPPTGNYFSIIYYTFDLNFFLKGYLKPHLKSILRNCRQILFGRQRLPKKTRIFNTLSQNKISSI*

Click here to download the sequence:
Link to NCBI Protein BLAST