Transcript Information: S_Transcript_220831.p1


Annotated TAIR IDAT3G01160.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:54655-57449 | Reverse length=713
E-Value1E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2126624655846
Replicate 23.7791075098516
Replicate 33.6404095695198
Condition 2: 8 Hour
Replicate 16.3315188217263
Replicate 26.3502474116027
Replicate 35.5289066381599
Condition 3: 24 Hour
Replicate 12.6727018952603
Replicate 22.8468409321024
Replicate 32.3041345622945


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_220831.p1 GENE.S_Transcript_220831~~S_Transcript_220831.p1 ORF type:5prime_partial len:613 (-),score=194.76,NUC153|PF08159.8|5.4e-12 S_Transcript_220831:102-1940(-)
GGGGGAAAGGAGGAGAGTGAAATTGAGTCGAGCGATTCAAAGCTGAGCTCTCAATCGAAATCCGAGTGGGAATCGGAACCGGAGAGTGATGGTTCAACGACCTCCACAACTGACACAGAAGATGAGGCTGATGTGGATATGTCAGGAGATGATGATTCTATTGAGGTGGAGAATGTACCAGTAATTGAGAAAGAAACGCATCGATTGGCTGTTGTTAACATGGACTGGAATCAAATCAAGGCTGTTGATTTGTTGGCGACATTGAAATCTTTCCTTCCAAAAGGAGGGCAAATTAAGTCCGTGGCTGTCTATCCTTCGGAATTTGGTCTCAAGCGTATGGAAGAGGAAGCAGTTCGTGGTCCAGTTGCGTTATTTGATGTGGAGAAGAAAGCGAATGACGAAGATGATGACGGTGATGAGATAGATATTGAAAAGCTGCGTGCCTATGAGAGAAGTAAGCTAAGGTATTACTATGCGGTAGTGGAATGTGACTCTACTGCTACTGCGAATTACCTTTATGAAGCTTGTGACGGGGTCGAGTTTGAACGATCATCTAATGTACTGGACTTGAGATTCATACCTGATTCCATGGATTTTCACCATCAGCCACGAGAAGTGGCAACAGAGGTGCCGGCAGATTATGAAGGTTTAGACTTCCATACTCGGGCATTGCAGCACAGCAATGTCCACATCTCTTGGGATGATGATGATCCGCACCGTGTGAAGAAATTGAATCGGAAATTTAATGAAAAACAGCTTGAAGAATTGCAGTTAAAGGAATTCTTGGCTTCTGATGAGAGTGGAAGTAATGATGACGAGAACAGTGATGAAGATCCCTCAGAAAAGAAGCTGAAGAAAGTGGATAAGTATCGTGCCCTACTCCAGTCTGGTGATGGTTCAGAGGAAGAGGATAATGAAGGTCAGGATATGGAAGTCACCTTCAATGCTGGCTTAGAAGAATTAAGCCAGAAAATTCTTAAGAAGAAGGATAAAGAATCTGAAAGTGTGTGGGAGGCCTATCTTAGGAAGAGGAAAGAGAAAAAGAAGGCCAGGAAGAATAGATCGAAGAATTCATCTGACGATGAGAGTGATGAAAGTGATCAGGAGGCTCCTGAACAGCCAGATGACTTTTTTGAGGACGAGCCTTCTGTTCAAAAAGGTGAGAAGCTTGGTCATGGTAAAAAGAAGAGGGAGGAGAAGAGAATCCTGAATGATAAAGTAGCAGAAGCGAGTAAGGCAGAGCTTGAGTTATTACTTGCTGATGAGAAAGCAACAGATAATAATTTGAAGGGATACAAAATAAAACAGAAAAAGAGCAAGGGCAAGAAGGGTAAAGATGCCCCAGATGAAATGAAATTACCCACAGTTGACCATGCTGATCCACGATTCTCAGCTCTCTTCACTAATCCTGAATTTGCTTTGGATCCTACAGATCCTCAGTTCAAAAGGAGTGCAACATTTTTTCGGGAGTTGGCTCAAAAACAACAGAAGAGTCGAGAAGAAGATGCAGAGAAAGAGCCATTACAGTTTCCTAGAGACACTACCAATGACTCTGCTGAGAGCAAAGACGAGCACAAAGATGGTACTTCACAAAAGGAGAAACATGAGCTATCTACAATTATAAAATCCATAAAGATGAAGTCTCAGCAACTTCCAGCCTCTTCTAGTCGTAAGATAAAACAAGATAAGGCTGAGGTGGAAGGGTCAATCTCAAAGGGAAAGAAGCAAAAGCTTAGTATGTTTGAGGCAAATGGATCAACGAAAAAGGAAGAGAAGCATACACTTTCAAGCTTAGAACGTCCAAAGAAGAAAAAGGCCAAACTGAAGGATAAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_220831.p1 GENE.S_Transcript_220831~~S_Transcript_220831.p1 ORF type:5prime_partial len:613 (-),score=194.76,NUC153|PF08159.8|5.4e-12 S_Transcript_220831:102-1940(-)
GGKEESEIESSDSKLSSQSKSEWESEPESDGSTTSTTDTEDEADVDMSGDDDSIEVENVPVIEKETHRLAVVNMDWNQIKAVDLLATLKSFLPKGGQIKSVAVYPSEFGLKRMEEEAVRGPVALFDVEKKANDEDDDGDEIDIEKLRAYERSKLRYYYAVVECDSTATANYLYEACDGVEFERSSNVLDLRFIPDSMDFHHQPREVATEVPADYEGLDFHTRALQHSNVHISWDDDDPHRVKKLNRKFNEKQLEELQLKEFLASDESGSNDDENSDEDPSEKKLKKVDKYRALLQSGDGSEEEDNEGQDMEVTFNAGLEELSQKILKKKDKESESVWEAYLRKRKEKKKARKNRSKNSSDDESDESDQEAPEQPDDFFEDEPSVQKGEKLGHGKKKREEKRILNDKVAEASKAELELLLADEKATDNNLKGYKIKQKKSKGKKGKDAPDEMKLPTVDHADPRFSALFTNPEFALDPTDPQFKRSATFFRELAQKQQKSREEDAEKEPLQFPRDTTNDSAESKDEHKDGTSQKEKHELSTIIKSIKMKSQQLPASSSRKIKQDKAEVEGSISKGKKQKLSMFEANGSTKKEEKHTLSSLERPKKKKAKLKDKN*

Click here to download the sequence:
Link to NCBI Protein BLAST